Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-4A0A075B6B4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-4A0A075B6B4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-4A0A075B6B4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-4A0A075B6B4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-4A0A075B6B4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-4A0A075B6B4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav6-4A0A075B6B4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-4A0A075B6B4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-4A0A075B6B4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav6-4A0A075B6B4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-4A0A075B6B4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-4A0A075B6B4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-4A0A075B6B4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav6-4A0A075B6B4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-4A0A075B6B4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav6-4A0A075B6B4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-4A0A075B6B4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-4A0A075B6B4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-4A0A075B6B4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-4A0A075B6B4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Trav6-4A0A075B6B4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6-4A0A075B6B4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.58■□□□□ 0.24
Trav6-4A0A075B6B4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6-4A0A075B6B4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.58■□□□□ 0.24
Trav6-4A0A075B6B4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6-4A0A075B6B4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6-4A0A075B6B4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Trav6-4A0A075B6B4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trav6-4A0A075B6B4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6-4A0A075B6B4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-4A0A075B6B4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-4A0A075B6B4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-4A0A075B6B4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-4A0A075B6B4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav6-4A0A075B6B4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-4A0A075B6B4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-4A0A075B6B4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-4A0A075B6B4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-4A0A075B6B4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-4A0A075B6B4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-4A0A075B6B4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.56■□□□□ 0.24
Trav6-4A0A075B6B4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-4A0A075B6B4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.56■□□□□ 0.24
Trav6-4A0A075B6B4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav6-4A0A075B6B4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-4A0A075B6B4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-4A0A075B6B4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-4A0A075B6B4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav6-4A0A075B6B4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav6-4A0A075B6B4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-4A0A075B6B4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-4A0A075B6B4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-4A0A075B6B4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-4A0A075B6B4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-4A0A075B6B4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-4A0A075B6B4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-4A0A075B6B4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-4A0A075B6B4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav6-4A0A075B6B4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-4A0A075B6B4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-4A0A075B6B4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav6-4A0A075B6B4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav6-4A0A075B6B4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-4A0A075B6B4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-4A0A075B6B4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-4A0A075B6B4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-4A0A075B6B4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-4A0A075B6B4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-4A0A075B6B4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav6-4A0A075B6B4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav6-4A0A075B6B4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-4A0A075B6B4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-4A0A075B6B4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav6-4A0A075B6B4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-4A0A075B6B4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-4A0A075B6B4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-4A0A075B6B4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6-4A0A075B6B4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6-4A0A075B6B4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trav6-4A0A075B6B4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6-4A0A075B6B4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6-4A0A075B6B4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-4A0A075B6B4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms