Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3-4A0A075B654 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3-4A0A075B654 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3-4A0A075B654 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3-4A0A075B654 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav3-4A0A075B654 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Trav3-4A0A075B654 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3-4A0A075B654 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-4A0A075B654 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav3-4A0A075B654 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-4A0A075B654 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav3-4A0A075B654 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.5□□□□□ -0.09
Trav3-4A0A075B654 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-4A0A075B654 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-4A0A075B654 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav3-4A0A075B654 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-4A0A075B654 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav3-4A0A075B654 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-4A0A075B654 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-4A0A075B654 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav3-4A0A075B654 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-4A0A075B654 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-4A0A075B654 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-4A0A075B654 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Trav3-4A0A075B654 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-4A0A075B654 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-4A0A075B654 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-4A0A075B654 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
Trav3-4A0A075B654 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-4A0A075B654 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-4A0A075B654 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-4A0A075B654 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-4A0A075B654 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-4A0A075B654 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-4A0A075B654 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-4A0A075B654 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav3-4A0A075B654 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-4A0A075B654 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-4A0A075B654 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-4A0A075B654 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trav3-4A0A075B654 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-4A0A075B654 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-4A0A075B654 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-4A0A075B654 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav3-4A0A075B654 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-4A0A075B654 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-4A0A075B654 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-4A0A075B654 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-4A0A075B654 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav3-4A0A075B654 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav3-4A0A075B654 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav3-4A0A075B654 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav3-4A0A075B654 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav3-4A0A075B654 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav3-4A0A075B654 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-4A0A075B654 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-4A0A075B654 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-4A0A075B654 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-4A0A075B654 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-4A0A075B654 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-4A0A075B654 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav3-4A0A075B654 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-4A0A075B654 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav3-4A0A075B654 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-4A0A075B654 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.43□□□□□ -0.1
Trav3-4A0A075B654 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-4A0A075B654 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-4A0A075B654 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-4A0A075B654 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3-4A0A075B654 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-4A0A075B654 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav3-4A0A075B654 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav3-4A0A075B654 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-4A0A075B654 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-4A0A075B654 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-4A0A075B654 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-4A0A075B654 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-4A0A075B654 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-4A0A075B654 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3-4A0A075B654 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-4A0A075B654 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-4A0A075B654 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-4A0A075B654 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav3-4A0A075B654 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav3-4A0A075B654 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3-4A0A075B654 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav3-4A0A075B654 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms