Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9n-4A0A075B631 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav9n-4A0A075B631 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9n-4A0A075B631 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav9n-4A0A075B631 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav9n-4A0A075B631 AC153524.1-201ENSMUST00000220436 1935 ntBASIC14.7□□□□□ -0.06
Trav9n-4A0A075B631 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9n-4A0A075B631 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav9n-4A0A075B631 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9n-4A0A075B631 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9n-4A0A075B631 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav9n-4A0A075B631 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav9n-4A0A075B631 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav9n-4A0A075B631 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9n-4A0A075B631 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav9n-4A0A075B631 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9n-4A0A075B631 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9n-4A0A075B631 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav9n-4A0A075B631 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-4A0A075B631 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav9n-4A0A075B631 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-4A0A075B631 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav9n-4A0A075B631 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-4A0A075B631 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Gm26766-202ENSMUST00000227544 2347 ntBASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav9n-4A0A075B631 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-4A0A075B631 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-4A0A075B631 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-4A0A075B631 Gm22567-201ENSMUST00000175542 342 ntBASIC14.67□□□□□ -0.06
Trav9n-4A0A075B631 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav9n-4A0A075B631 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav9n-4A0A075B631 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav9n-4A0A075B631 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav9n-4A0A075B631 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav9n-4A0A075B631 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav9n-4A0A075B631 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav9n-4A0A075B631 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-4A0A075B631 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-4A0A075B631 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-4A0A075B631 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-4A0A075B631 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-4A0A075B631 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav9n-4A0A075B631 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-4A0A075B631 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav9n-4A0A075B631 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-4A0A075B631 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-4A0A075B631 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav9n-4A0A075B631 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-4A0A075B631 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-4A0A075B631 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-4A0A075B631 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-4A0A075B631 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-4A0A075B631 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-4A0A075B631 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-4A0A075B631 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav9n-4A0A075B631 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-4A0A075B631 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-4A0A075B631 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-4A0A075B631 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-4A0A075B631 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav9n-4A0A075B631 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trav9n-4A0A075B631 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-4A0A075B631 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-4A0A075B631 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-4A0A075B631 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-4A0A075B631 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav9n-4A0A075B631 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9n-4A0A075B631 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9n-4A0A075B631 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9n-4A0A075B631 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9n-4A0A075B631 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav9n-4A0A075B631 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-4A0A075B631 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-4A0A075B631 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Trav9n-4A0A075B631 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-4A0A075B631 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav9n-4A0A075B631 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-4A0A075B631 Gm44428-201ENSMUST00000204474 874 ntBASIC14.62□□□□□ -0.07
Trav9n-4A0A075B631 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav9n-4A0A075B631 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-4A0A075B631 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-4A0A075B631 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-4A0A075B631 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms