Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn9Q9Z0S7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn9Q9Z0S7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn9Q9Z0S7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.93■□□□□ 0.94
Cldn9Q9Z0S7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn9Q9Z0S7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.93■□□□□ 0.94
Cldn9Q9Z0S7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn9Q9Z0S7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Cldn9Q9Z0S7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn9Q9Z0S7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn9Q9Z0S7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Cldn9Q9Z0S7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn9Q9Z0S7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn9Q9Z0S7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn9Q9Z0S7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn9Q9Z0S7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn9Q9Z0S7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn9Q9Z0S7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.91■□□□□ 0.94
Cldn9Q9Z0S7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn9Q9Z0S7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn9Q9Z0S7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Cldn9Q9Z0S7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn9Q9Z0S7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn9Q9Z0S7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.9■□□□□ 0.94
Cldn9Q9Z0S7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn9Q9Z0S7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.9■□□□□ 0.94
Cldn9Q9Z0S7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn9Q9Z0S7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cldn9Q9Z0S7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cldn9Q9Z0S7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn9Q9Z0S7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn9Q9Z0S7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.89■□□□□ 0.93
Cldn9Q9Z0S7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn9Q9Z0S7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.89■□□□□ 0.93
Cldn9Q9Z0S7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cldn9Q9Z0S7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn9Q9Z0S7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn9Q9Z0S7 Gm11175-201ENSMUST00000116172 543 ntBASIC20.88■□□□□ 0.93
Cldn9Q9Z0S7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cldn9Q9Z0S7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn9Q9Z0S7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cldn9Q9Z0S7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn9Q9Z0S7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn9Q9Z0S7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cldn9Q9Z0S7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn9Q9Z0S7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn9Q9Z0S7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn9Q9Z0S7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn9Q9Z0S7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn9Q9Z0S7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn9Q9Z0S7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn9Q9Z0S7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn9Q9Z0S7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.86■□□□□ 0.93
Cldn9Q9Z0S7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn9Q9Z0S7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn9Q9Z0S7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cldn9Q9Z0S7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn9Q9Z0S7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cldn9Q9Z0S7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn9Q9Z0S7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.85■□□□□ 0.93
Cldn9Q9Z0S7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn9Q9Z0S7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn9Q9Z0S7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn9Q9Z0S7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn9Q9Z0S7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn9Q9Z0S7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn9Q9Z0S7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Cldn9Q9Z0S7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn9Q9Z0S7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.83■□□□□ 0.92
Cldn9Q9Z0S7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
Cldn9Q9Z0S7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.83■□□□□ 0.92
Cldn9Q9Z0S7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn9Q9Z0S7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn9Q9Z0S7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cldn9Q9Z0S7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn9Q9Z0S7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.82■□□□□ 0.92
Cldn9Q9Z0S7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn9Q9Z0S7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn9Q9Z0S7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn9Q9Z0S7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn9Q9Z0S7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn9Q9Z0S7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Cldn9Q9Z0S7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.81■□□□□ 0.92
Cldn9Q9Z0S7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn9Q9Z0S7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn9Q9Z0S7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn9Q9Z0S7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn9Q9Z0S7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn9Q9Z0S7 Gm27502-201ENSMUST00000183495 199 ntBASIC20.8■□□□□ 0.92
Cldn9Q9Z0S7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn9Q9Z0S7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn9Q9Z0S7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn9Q9Z0S7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn9Q9Z0S7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn9Q9Z0S7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn9Q9Z0S7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn9Q9Z0S7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cldn9Q9Z0S7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn9Q9Z0S7 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.78■□□□□ 0.92
Cldn9Q9Z0S7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms