Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Barx1Q9ER42 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Barx1Q9ER42 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Barx1Q9ER42 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Barx1Q9ER42 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Barx1Q9ER42 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Barx1Q9ER42 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Barx1Q9ER42 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Barx1Q9ER42 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Barx1Q9ER42 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Barx1Q9ER42 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Barx1Q9ER42 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Barx1Q9ER42 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.64■□□□□ 0.73
Barx1Q9ER42 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Barx1Q9ER42 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Barx1Q9ER42 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Barx1Q9ER42 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Barx1Q9ER42 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.63■□□□□ 0.73
Barx1Q9ER42 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Barx1Q9ER42 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Barx1Q9ER42 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Barx1Q9ER42 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Barx1Q9ER42 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.61■□□□□ 0.73
Barx1Q9ER42 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.61■□□□□ 0.73
Barx1Q9ER42 Gm40881-201ENSMUST00000223397 166 ntBASIC19.61■□□□□ 0.73
Barx1Q9ER42 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.61■□□□□ 0.73
Barx1Q9ER42 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Barx1Q9ER42 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Barx1Q9ER42 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Barx1Q9ER42 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Barx1Q9ER42 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Barx1Q9ER42 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Barx1Q9ER42 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Barx1Q9ER42 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Barx1Q9ER42 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.6■□□□□ 0.73
Barx1Q9ER42 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.6■□□□□ 0.73
Barx1Q9ER42 Gm22238-201ENSMUST00000175222 88 ntBASIC19.6■□□□□ 0.73
Barx1Q9ER42 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Barx1Q9ER42 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Barx1Q9ER42 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Barx1Q9ER42 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.59■□□□□ 0.73
Barx1Q9ER42 Serp2-204ENSMUST00000228055 705 ntBASIC19.59■□□□□ 0.73
Barx1Q9ER42 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Barx1Q9ER42 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Barx1Q9ER42 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.59■□□□□ 0.73
Barx1Q9ER42 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Barx1Q9ER42 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Barx1Q9ER42 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
Barx1Q9ER42 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Barx1Q9ER42 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Barx1Q9ER42 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Barx1Q9ER42 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.58■□□□□ 0.72
Barx1Q9ER42 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Barx1Q9ER42 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Barx1Q9ER42 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Barx1Q9ER42 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Barx1Q9ER42 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Barx1Q9ER42 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Barx1Q9ER42 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.57■□□□□ 0.72
Barx1Q9ER42 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Barx1Q9ER42 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Barx1Q9ER42 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.57■□□□□ 0.72
Barx1Q9ER42 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Barx1Q9ER42 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Barx1Q9ER42 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Barx1Q9ER42 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Barx1Q9ER42 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Barx1Q9ER42 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Barx1Q9ER42 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Barx1Q9ER42 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Barx1Q9ER42 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Barx1Q9ER42 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Barx1Q9ER42 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Barx1Q9ER42 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.55■□□□□ 0.72
Barx1Q9ER42 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Barx1Q9ER42 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Barx1Q9ER42 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Barx1Q9ER42 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Barx1Q9ER42 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Barx1Q9ER42 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Barx1Q9ER42 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Barx1Q9ER42 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Barx1Q9ER42 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.54■□□□□ 0.72
Barx1Q9ER42 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Barx1Q9ER42 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Barx1Q9ER42 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Barx1Q9ER42 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Barx1Q9ER42 Gm12922-201ENSMUST00000120626 809 ntBASIC19.53■□□□□ 0.72
Barx1Q9ER42 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.53■□□□□ 0.72
Barx1Q9ER42 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.53■□□□□ 0.72
Barx1Q9ER42 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Barx1Q9ER42 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Barx1Q9ER42 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Barx1Q9ER42 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Barx1Q9ER42 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Barx1Q9ER42 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Barx1Q9ER42 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Barx1Q9ER42 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Barx1Q9ER42 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.51■□□□□ 0.71
Barx1Q9ER42 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms