Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lsm7Q9CQQ8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lsm7Q9CQQ8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Lsm7Q9CQQ8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.04■■□□□ 1.12
Lsm7Q9CQQ8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lsm7Q9CQQ8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lsm7Q9CQQ8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Lsm7Q9CQQ8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lsm7Q9CQQ8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lsm7Q9CQQ8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.03■■□□□ 1.12
Lsm7Q9CQQ8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Lsm7Q9CQQ8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lsm7Q9CQQ8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lsm7Q9CQQ8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lsm7Q9CQQ8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.02■■□□□ 1.12
Lsm7Q9CQQ8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.01■■□□□ 1.11
Lsm7Q9CQQ8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lsm7Q9CQQ8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Lsm7Q9CQQ8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.01■■□□□ 1.11
Lsm7Q9CQQ8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lsm7Q9CQQ8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lsm7Q9CQQ8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lsm7Q9CQQ8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Lsm7Q9CQQ8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Lsm7Q9CQQ8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lsm7Q9CQQ8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22■■□□□ 1.11
Lsm7Q9CQQ8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22■■□□□ 1.11
Lsm7Q9CQQ8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22■■□□□ 1.11
Lsm7Q9CQQ8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22■■□□□ 1.11
Lsm7Q9CQQ8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lsm7Q9CQQ8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lsm7Q9CQQ8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Lsm7Q9CQQ8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lsm7Q9CQQ8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Lsm7Q9CQQ8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lsm7Q9CQQ8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.98■■□□□ 1.11
Lsm7Q9CQQ8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lsm7Q9CQQ8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lsm7Q9CQQ8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Lsm7Q9CQQ8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Lsm7Q9CQQ8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lsm7Q9CQQ8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lsm7Q9CQQ8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Lsm7Q9CQQ8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Lsm7Q9CQQ8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Lsm7Q9CQQ8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lsm7Q9CQQ8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lsm7Q9CQQ8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Lsm7Q9CQQ8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lsm7Q9CQQ8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lsm7Q9CQQ8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Lsm7Q9CQQ8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.95■■□□□ 1.1
Lsm7Q9CQQ8 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.95■■□□□ 1.1
Lsm7Q9CQQ8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.95■■□□□ 1.1
Lsm7Q9CQQ8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Lsm7Q9CQQ8 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.94■■□□□ 1.1
Lsm7Q9CQQ8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lsm7Q9CQQ8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lsm7Q9CQQ8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lsm7Q9CQQ8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lsm7Q9CQQ8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Lsm7Q9CQQ8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lsm7Q9CQQ8 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.93■■□□□ 1.1
Lsm7Q9CQQ8 Gm10232-201ENSMUST00000089221 720 ntBASIC21.93■■□□□ 1.1
Lsm7Q9CQQ8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Lsm7Q9CQQ8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lsm7Q9CQQ8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lsm7Q9CQQ8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lsm7Q9CQQ8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lsm7Q9CQQ8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Lsm7Q9CQQ8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Lsm7Q9CQQ8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Lsm7Q9CQQ8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lsm7Q9CQQ8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Lsm7Q9CQQ8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lsm7Q9CQQ8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lsm7Q9CQQ8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lsm7Q9CQQ8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.91■■□□□ 1.1
Lsm7Q9CQQ8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Lsm7Q9CQQ8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lsm7Q9CQQ8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.9■■□□□ 1.1
Lsm7Q9CQQ8 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.9■■□□□ 1.1
Lsm7Q9CQQ8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lsm7Q9CQQ8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lsm7Q9CQQ8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lsm7Q9CQQ8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lsm7Q9CQQ8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lsm7Q9CQQ8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lsm7Q9CQQ8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Lsm7Q9CQQ8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Lsm7Q9CQQ8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.88■■□□□ 1.09
Lsm7Q9CQQ8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lsm7Q9CQQ8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Lsm7Q9CQQ8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lsm7Q9CQQ8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lsm7Q9CQQ8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lsm7Q9CQQ8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lsm7Q9CQQ8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Lsm7Q9CQQ8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lsm7Q9CQQ8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms