Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.68■□□□□ 0.9
Nck1Q99M51 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nck1Q99M51 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nck1Q99M51 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.68■□□□□ 0.9
Nck1Q99M51 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nck1Q99M51 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nck1Q99M51 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nck1Q99M51 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Nck1Q99M51 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nck1Q99M51 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Nck1Q99M51 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nck1Q99M51 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nck1Q99M51 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.66■□□□□ 0.9
Nck1Q99M51 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nck1Q99M51 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nck1Q99M51 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nck1Q99M51 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nck1Q99M51 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nck1Q99M51 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.65■□□□□ 0.9
Nck1Q99M51 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nck1Q99M51 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.65■□□□□ 0.9
Nck1Q99M51 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nck1Q99M51 Gm4799-201ENSMUST00000095396 657 ntBASIC20.65■□□□□ 0.9
Nck1Q99M51 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nck1Q99M51 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nck1Q99M51 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nck1Q99M51 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.64■□□□□ 0.89
Nck1Q99M51 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.64■□□□□ 0.89
Nck1Q99M51 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nck1Q99M51 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.64■□□□□ 0.89
Nck1Q99M51 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nck1Q99M51 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nck1Q99M51 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nck1Q99M51 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nck1Q99M51 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nck1Q99M51 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nck1Q99M51 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Nck1Q99M51 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nck1Q99M51 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.63■□□□□ 0.89
Nck1Q99M51 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nck1Q99M51 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nck1Q99M51 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nck1Q99M51 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nck1Q99M51 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nck1Q99M51 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nck1Q99M51 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nck1Q99M51 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nck1Q99M51 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Nck1Q99M51 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.61■□□□□ 0.89
Nck1Q99M51 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nck1Q99M51 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nck1Q99M51 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nck1Q99M51 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nck1Q99M51 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nck1Q99M51 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nck1Q99M51 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nck1Q99M51 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.6■□□□□ 0.89
Nck1Q99M51 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nck1Q99M51 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nck1Q99M51 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nck1Q99M51 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Nck1Q99M51 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nck1Q99M51 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Nck1Q99M51 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nck1Q99M51 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nck1Q99M51 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nck1Q99M51 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.59■□□□□ 0.89
Nck1Q99M51 Gm22567-201ENSMUST00000175542 342 ntBASIC20.59■□□□□ 0.89
Nck1Q99M51 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
Nck1Q99M51 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nck1Q99M51 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nck1Q99M51 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nck1Q99M51 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nck1Q99M51 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nck1Q99M51 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nck1Q99M51 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.57■□□□□ 0.88
Nck1Q99M51 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Nck1Q99M51 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nck1Q99M51 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nck1Q99M51 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nck1Q99M51 Gm9812-201ENSMUST00000061934 968 ntBASIC20.57■□□□□ 0.88
Nck1Q99M51 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.57■□□□□ 0.88
Nck1Q99M51 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nck1Q99M51 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Nck1Q99M51 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Nck1Q99M51 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Nck1Q99M51 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Nck1Q99M51 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nck1Q99M51 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.56■□□□□ 0.88
Nck1Q99M51 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nck1Q99M51 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nck1Q99M51 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.55■□□□□ 0.88
Nck1Q99M51 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.55■□□□□ 0.88
Nck1Q99M51 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nck1Q99M51 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nck1Q99M51 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nck1Q99M51 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.54■□□□□ 0.88
Nck1Q99M51 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.54■□□□□ 0.88
Nck1Q99M51 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nck1Q99M51 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms