Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
Ddx41Q91VN6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.87■■□□□ 1.57
Ddx41Q91VN6 Gm15546-201ENSMUST00000122095 826 ntBASIC24.87■■□□□ 1.57
Ddx41Q91VN6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Ddx41Q91VN6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Ddx41Q91VN6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.86■■□□□ 1.57
Ddx41Q91VN6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx41Q91VN6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.86■■□□□ 1.57
Ddx41Q91VN6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC24.86■■□□□ 1.57
Ddx41Q91VN6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx41Q91VN6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx41Q91VN6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx41Q91VN6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Ddx41Q91VN6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx41Q91VN6 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.85■■□□□ 1.57
Ddx41Q91VN6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.85■■□□□ 1.57
Ddx41Q91VN6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx41Q91VN6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx41Q91VN6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx41Q91VN6 Gm43566-201ENSMUST00000196851 808 ntBASIC24.85■■□□□ 1.57
Ddx41Q91VN6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx41Q91VN6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx41Q91VN6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx41Q91VN6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx41Q91VN6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx41Q91VN6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx41Q91VN6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx41Q91VN6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ddx41Q91VN6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ddx41Q91VN6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.83■■□□□ 1.57
Ddx41Q91VN6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Ddx41Q91VN6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Ddx41Q91VN6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Ddx41Q91VN6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Ddx41Q91VN6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx41Q91VN6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx41Q91VN6 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.82■■□□□ 1.56
Ddx41Q91VN6 Gm45444-201ENSMUST00000211394 898 ntBASIC24.82■■□□□ 1.56
Ddx41Q91VN6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx41Q91VN6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx41Q91VN6 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.82■■□□□ 1.56
Ddx41Q91VN6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx41Q91VN6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx41Q91VN6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24.81■■□□□ 1.56
Ddx41Q91VN6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.81■■□□□ 1.56
Ddx41Q91VN6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx41Q91VN6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx41Q91VN6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx41Q91VN6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Ddx41Q91VN6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx41Q91VN6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx41Q91VN6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx41Q91VN6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx41Q91VN6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.8■■□□□ 1.56
Ddx41Q91VN6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Ddx41Q91VN6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx41Q91VN6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx41Q91VN6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx41Q91VN6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx41Q91VN6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx41Q91VN6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx41Q91VN6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx41Q91VN6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Ddx41Q91VN6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.78■■□□□ 1.56
Ddx41Q91VN6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx41Q91VN6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.78■■□□□ 1.56
Ddx41Q91VN6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx41Q91VN6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Ddx41Q91VN6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx41Q91VN6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx41Q91VN6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx41Q91VN6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx41Q91VN6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx41Q91VN6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx41Q91VN6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx41Q91VN6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx41Q91VN6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Ddx41Q91VN6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx41Q91VN6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx41Q91VN6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ddx41Q91VN6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Ddx41Q91VN6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.74■■□□□ 1.55
Ddx41Q91VN6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.74■■□□□ 1.55
Ddx41Q91VN6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ddx41Q91VN6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ddx41Q91VN6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ddx41Q91VN6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ddx41Q91VN6 Gm38160-201ENSMUST00000193090 2499 ntBASIC24.73■■□□□ 1.55
Ddx41Q91VN6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ddx41Q91VN6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ddx41Q91VN6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ddx41Q91VN6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ddx41Q91VN6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ddx41Q91VN6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx41Q91VN6 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.72■■□□□ 1.55
Ddx41Q91VN6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx41Q91VN6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ddx41Q91VN6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Ddx41Q91VN6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx41Q91VN6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms