Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q8VDP2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q8VDP2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Q8VDP2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Q8VDP2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q8VDP2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.12■□□□□ 0.97
Q8VDP2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Q8VDP2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Q8VDP2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q8VDP2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Q8VDP2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Q8VDP2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q8VDP2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Q8VDP2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q8VDP2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Q8VDP2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Q8VDP2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Q8VDP2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Q8VDP2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q8VDP2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q8VDP2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Q8VDP2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q8VDP2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q8VDP2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q8VDP2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Q8VDP2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q8VDP2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q8VDP2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Q8VDP2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Q8VDP2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Q8VDP2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Q8VDP2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Q8VDP2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
Q8VDP2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Q8VDP2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.07■□□□□ 0.96
Q8VDP2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Q8VDP2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.06■□□□□ 0.96
Q8VDP2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Q8VDP2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Q8VDP2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Q8VDP2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Q8VDP2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Q8VDP2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Q8VDP2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Q8VDP2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Q8VDP2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q8VDP2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Q8VDP2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Q8VDP2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q8VDP2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q8VDP2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q8VDP2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Q8VDP2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Q8VDP2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Q8VDP2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Q8VDP2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Q8VDP2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q8VDP2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Q8VDP2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
Q8VDP2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
Q8VDP2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Q8VDP2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q8VDP2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q8VDP2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q8VDP2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Q8VDP2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Q8VDP2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Q8VDP2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21■□□□□ 0.95
Q8VDP2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Q8VDP2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Q8VDP2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Q8VDP2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Q8VDP2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q8VDP2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Q8VDP2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Q8VDP2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q8VDP2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.99■□□□□ 0.95
Q8VDP2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q8VDP2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Q8VDP2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q8VDP2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q8VDP2 Gm45855-201ENSMUST00000212546 880 ntBASIC20.98■□□□□ 0.95
Q8VDP2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q8VDP2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q8VDP2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q8VDP2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Q8VDP2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q8VDP2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q8VDP2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q8VDP2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Q8VDP2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.97■□□□□ 0.95
Q8VDP2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Q8VDP2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Q8VDP2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Q8VDP2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q8VDP2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Q8VDP2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Q8VDP2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q8VDP2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.96■□□□□ 0.95
Q8VDP2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms