Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc3Q8R323 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Rfc3Q8R323 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.96■□□□□ 0.79
Rfc3Q8R323 Gm13238-201ENSMUST00000117655 780 ntBASIC19.96■□□□□ 0.79
Rfc3Q8R323 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc3Q8R323 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc3Q8R323 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc3Q8R323 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc3Q8R323 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Rfc3Q8R323 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc3Q8R323 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc3Q8R323 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc3Q8R323 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Rfc3Q8R323 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc3Q8R323 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc3Q8R323 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc3Q8R323 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.94■□□□□ 0.78
Rfc3Q8R323 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc3Q8R323 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Rfc3Q8R323 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc3Q8R323 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc3Q8R323 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.94■□□□□ 0.78
Rfc3Q8R323 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.94■□□□□ 0.78
Rfc3Q8R323 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc3Q8R323 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc3Q8R323 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rfc3Q8R323 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfc3Q8R323 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfc3Q8R323 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc3Q8R323 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc3Q8R323 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rfc3Q8R323 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc3Q8R323 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.92■□□□□ 0.78
Rfc3Q8R323 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rfc3Q8R323 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc3Q8R323 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.92■□□□□ 0.78
Rfc3Q8R323 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc3Q8R323 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfc3Q8R323 Gm15546-201ENSMUST00000122095 826 ntBASIC19.91■□□□□ 0.78
Rfc3Q8R323 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfc3Q8R323 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rfc3Q8R323 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rfc3Q8R323 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.9■□□□□ 0.78
Rfc3Q8R323 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc3Q8R323 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc3Q8R323 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.9■□□□□ 0.78
Rfc3Q8R323 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc3Q8R323 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc3Q8R323 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfc3Q8R323 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rfc3Q8R323 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfc3Q8R323 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfc3Q8R323 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rfc3Q8R323 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfc3Q8R323 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rfc3Q8R323 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfc3Q8R323 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc3Q8R323 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rfc3Q8R323 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc3Q8R323 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc3Q8R323 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.88■□□□□ 0.77
Rfc3Q8R323 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Rfc3Q8R323 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc3Q8R323 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc3Q8R323 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc3Q8R323 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc3Q8R323 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc3Q8R323 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.87■□□□□ 0.77
Rfc3Q8R323 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.87■□□□□ 0.77
Rfc3Q8R323 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.87■□□□□ 0.77
Rfc3Q8R323 Gm15820-201ENSMUST00000201566 728 ntBASIC19.87■□□□□ 0.77
Rfc3Q8R323 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.87■□□□□ 0.77
Rfc3Q8R323 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc3Q8R323 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rfc3Q8R323 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc3Q8R323 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc3Q8R323 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc3Q8R323 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc3Q8R323 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rfc3Q8R323 Gm45444-201ENSMUST00000211394 898 ntBASIC19.86■□□□□ 0.77
Rfc3Q8R323 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rfc3Q8R323 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Rfc3Q8R323 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.85■□□□□ 0.77
Rfc3Q8R323 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.85■□□□□ 0.77
Rfc3Q8R323 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc3Q8R323 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Rfc3Q8R323 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc3Q8R323 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Rfc3Q8R323 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.85■□□□□ 0.77
Rfc3Q8R323 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc3Q8R323 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rfc3Q8R323 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rfc3Q8R323 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rfc3Q8R323 Gm43566-201ENSMUST00000196851 808 ntBASIC19.84■□□□□ 0.77
Rfc3Q8R323 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rfc3Q8R323 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc3Q8R323 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc3Q8R323 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc3Q8R323 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rfc3Q8R323 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms