Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubqln1Q8R317 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubqln1Q8R317 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubqln1Q8R317 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubqln1Q8R317 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.54■□□□□ 0.88
Ubqln1Q8R317 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ubqln1Q8R317 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.54■□□□□ 0.88
Ubqln1Q8R317 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.54■□□□□ 0.88
Ubqln1Q8R317 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.54■□□□□ 0.88
Ubqln1Q8R317 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubqln1Q8R317 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubqln1Q8R317 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ubqln1Q8R317 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ubqln1Q8R317 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ubqln1Q8R317 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubqln1Q8R317 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubqln1Q8R317 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.53■□□□□ 0.88
Ubqln1Q8R317 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubqln1Q8R317 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubqln1Q8R317 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ubqln1Q8R317 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubqln1Q8R317 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ubqln1Q8R317 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ubqln1Q8R317 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ubqln1Q8R317 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ubqln1Q8R317 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ubqln1Q8R317 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubqln1Q8R317 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubqln1Q8R317 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ubqln1Q8R317 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubqln1Q8R317 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.52■□□□□ 0.88
Ubqln1Q8R317 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubqln1Q8R317 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubqln1Q8R317 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ubqln1Q8R317 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubqln1Q8R317 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubqln1Q8R317 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Ubqln1Q8R317 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ubqln1Q8R317 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubqln1Q8R317 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ubqln1Q8R317 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubqln1Q8R317 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ubqln1Q8R317 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.5■□□□□ 0.87
Ubqln1Q8R317 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.5■□□□□ 0.87
Ubqln1Q8R317 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubqln1Q8R317 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.5■□□□□ 0.87
Ubqln1Q8R317 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubqln1Q8R317 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubqln1Q8R317 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ubqln1Q8R317 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubqln1Q8R317 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubqln1Q8R317 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubqln1Q8R317 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.49■□□□□ 0.87
Ubqln1Q8R317 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ubqln1Q8R317 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubqln1Q8R317 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ubqln1Q8R317 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Ubqln1Q8R317 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubqln1Q8R317 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubqln1Q8R317 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ubqln1Q8R317 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubqln1Q8R317 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubqln1Q8R317 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubqln1Q8R317 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.47■□□□□ 0.87
Ubqln1Q8R317 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubqln1Q8R317 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubqln1Q8R317 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubqln1Q8R317 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ubqln1Q8R317 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ubqln1Q8R317 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ubqln1Q8R317 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ubqln1Q8R317 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Ubqln1Q8R317 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Ubqln1Q8R317 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubqln1Q8R317 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubqln1Q8R317 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubqln1Q8R317 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ubqln1Q8R317 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.45■□□□□ 0.86
Ubqln1Q8R317 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubqln1Q8R317 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ubqln1Q8R317 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubqln1Q8R317 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ubqln1Q8R317 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubqln1Q8R317 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ubqln1Q8R317 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ubqln1Q8R317 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ubqln1Q8R317 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubqln1Q8R317 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ubqln1Q8R317 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.43■□□□□ 0.86
Ubqln1Q8R317 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubqln1Q8R317 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.42■□□□□ 0.86
Ubqln1Q8R317 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubqln1Q8R317 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubqln1Q8R317 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubqln1Q8R317 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubqln1Q8R317 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubqln1Q8R317 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubqln1Q8R317 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Ubqln1Q8R317 Gm10420-201ENSMUST00000121713 882 ntBASIC20.4■□□□□ 0.86
Ubqln1Q8R317 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms