Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
PdgfcQ8CI19 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PdgfcQ8CI19 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PdgfcQ8CI19 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
PdgfcQ8CI19 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PdgfcQ8CI19 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.35■■□□□ 1.49
PdgfcQ8CI19 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PdgfcQ8CI19 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PdgfcQ8CI19 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PdgfcQ8CI19 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PdgfcQ8CI19 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PdgfcQ8CI19 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
PdgfcQ8CI19 Gm7417-201ENSMUST00000192950 473 ntBASIC24.35■■□□□ 1.49
PdgfcQ8CI19 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PdgfcQ8CI19 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PdgfcQ8CI19 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PdgfcQ8CI19 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PdgfcQ8CI19 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.34■■□□□ 1.49
PdgfcQ8CI19 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PdgfcQ8CI19 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PdgfcQ8CI19 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.33■■□□□ 1.49
PdgfcQ8CI19 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.48
PdgfcQ8CI19 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PdgfcQ8CI19 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PdgfcQ8CI19 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PdgfcQ8CI19 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PdgfcQ8CI19 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC24.31■■□□□ 1.48
PdgfcQ8CI19 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
PdgfcQ8CI19 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
PdgfcQ8CI19 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PdgfcQ8CI19 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PdgfcQ8CI19 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PdgfcQ8CI19 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.3■■□□□ 1.48
PdgfcQ8CI19 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PdgfcQ8CI19 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.3■■□□□ 1.48
PdgfcQ8CI19 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.3■■□□□ 1.48
PdgfcQ8CI19 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PdgfcQ8CI19 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.3■■□□□ 1.48
PdgfcQ8CI19 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PdgfcQ8CI19 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PdgfcQ8CI19 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PdgfcQ8CI19 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PdgfcQ8CI19 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PdgfcQ8CI19 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PdgfcQ8CI19 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PdgfcQ8CI19 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PdgfcQ8CI19 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PdgfcQ8CI19 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PdgfcQ8CI19 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PdgfcQ8CI19 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PdgfcQ8CI19 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PdgfcQ8CI19 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PdgfcQ8CI19 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.27■■□□□ 1.48
PdgfcQ8CI19 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PdgfcQ8CI19 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PdgfcQ8CI19 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.26■■□□□ 1.47
PdgfcQ8CI19 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PdgfcQ8CI19 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PdgfcQ8CI19 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PdgfcQ8CI19 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PdgfcQ8CI19 Nsd1-206ENSMUST00000224918 1001 ntBASIC24.25■■□□□ 1.47
PdgfcQ8CI19 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PdgfcQ8CI19 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PdgfcQ8CI19 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PdgfcQ8CI19 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PdgfcQ8CI19 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC24.24■■□□□ 1.47
PdgfcQ8CI19 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PdgfcQ8CI19 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PdgfcQ8CI19 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PdgfcQ8CI19 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.23■■□□□ 1.47
PdgfcQ8CI19 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.23■■□□□ 1.47
PdgfcQ8CI19 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
PdgfcQ8CI19 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.23■■□□□ 1.47
PdgfcQ8CI19 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PdgfcQ8CI19 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PdgfcQ8CI19 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PdgfcQ8CI19 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PdgfcQ8CI19 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.22■■□□□ 1.47
PdgfcQ8CI19 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PdgfcQ8CI19 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.21■■□□□ 1.47
PdgfcQ8CI19 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
PdgfcQ8CI19 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.2■■□□□ 1.46
PdgfcQ8CI19 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PdgfcQ8CI19 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PdgfcQ8CI19 Gm22238-201ENSMUST00000175222 88 ntBASIC24.2■■□□□ 1.46
PdgfcQ8CI19 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.2■■□□□ 1.46
PdgfcQ8CI19 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.2■■□□□ 1.46
PdgfcQ8CI19 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.2■■□□□ 1.46
PdgfcQ8CI19 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.2■■□□□ 1.46
PdgfcQ8CI19 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PdgfcQ8CI19 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PdgfcQ8CI19 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.19■■□□□ 1.46
PdgfcQ8CI19 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.19■■□□□ 1.46
PdgfcQ8CI19 Gm40881-201ENSMUST00000223397 166 ntBASIC24.19■■□□□ 1.46
PdgfcQ8CI19 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.18■■□□□ 1.46
PdgfcQ8CI19 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PdgfcQ8CI19 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PdgfcQ8CI19 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PdgfcQ8CI19 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC24.18■■□□□ 1.46
PdgfcQ8CI19 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms