Protein–RNA interactions for Protein: Q8CH19

Csnka2ip, Casein kinase II subunit alpha'-interacting protein, mousemouse

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnka2ipQ8CH19 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Csnka2ipQ8CH19 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.5■□□□□ 0.87
Csnka2ipQ8CH19 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Csnka2ipQ8CH19 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Csnka2ipQ8CH19 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Csnka2ipQ8CH19 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Csnka2ipQ8CH19 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Csnka2ipQ8CH19 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Csnka2ipQ8CH19 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Csnka2ipQ8CH19 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Csnka2ipQ8CH19 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Csnka2ipQ8CH19 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Csnka2ipQ8CH19 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Csnka2ipQ8CH19 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Csnka2ipQ8CH19 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Csnka2ipQ8CH19 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Csnka2ipQ8CH19 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Csnka2ipQ8CH19 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.48■□□□□ 0.87
Csnka2ipQ8CH19 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Csnka2ipQ8CH19 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Csnka2ipQ8CH19 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Csnka2ipQ8CH19 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Csnka2ipQ8CH19 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
Csnka2ipQ8CH19 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.47■□□□□ 0.87
Csnka2ipQ8CH19 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Csnka2ipQ8CH19 Gm45444-201ENSMUST00000211394 898 ntBASIC20.47■□□□□ 0.87
Csnka2ipQ8CH19 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Csnka2ipQ8CH19 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Csnka2ipQ8CH19 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Csnka2ipQ8CH19 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Csnka2ipQ8CH19 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.46■□□□□ 0.87
Csnka2ipQ8CH19 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Csnka2ipQ8CH19 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Csnka2ipQ8CH19 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Csnka2ipQ8CH19 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.45■□□□□ 0.86
Csnka2ipQ8CH19 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.45■□□□□ 0.86
Csnka2ipQ8CH19 Gm43566-201ENSMUST00000196851 808 ntBASIC20.45■□□□□ 0.86
Csnka2ipQ8CH19 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Csnka2ipQ8CH19 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Csnka2ipQ8CH19 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Csnka2ipQ8CH19 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Csnka2ipQ8CH19 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Csnka2ipQ8CH19 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Csnka2ipQ8CH19 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Csnka2ipQ8CH19 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Csnka2ipQ8CH19 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Csnka2ipQ8CH19 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Csnka2ipQ8CH19 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Csnka2ipQ8CH19 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Csnka2ipQ8CH19 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Csnka2ipQ8CH19 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Csnka2ipQ8CH19 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Csnka2ipQ8CH19 Gm15546-201ENSMUST00000122095 826 ntBASIC20.41■□□□□ 0.86
Csnka2ipQ8CH19 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.41■□□□□ 0.86
Csnka2ipQ8CH19 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.41■□□□□ 0.86
Csnka2ipQ8CH19 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Csnka2ipQ8CH19 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Csnka2ipQ8CH19 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Csnka2ipQ8CH19 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Csnka2ipQ8CH19 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.41■□□□□ 0.86
Csnka2ipQ8CH19 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Csnka2ipQ8CH19 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Csnka2ipQ8CH19 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Csnka2ipQ8CH19 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Csnka2ipQ8CH19 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Csnka2ipQ8CH19 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.4■□□□□ 0.86
Csnka2ipQ8CH19 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Csnka2ipQ8CH19 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Csnka2ipQ8CH19 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Csnka2ipQ8CH19 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Csnka2ipQ8CH19 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Csnka2ipQ8CH19 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.4■□□□□ 0.86
Csnka2ipQ8CH19 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Csnka2ipQ8CH19 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.39■□□□□ 0.86
Csnka2ipQ8CH19 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Csnka2ipQ8CH19 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Csnka2ipQ8CH19 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Csnka2ipQ8CH19 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Csnka2ipQ8CH19 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.39■□□□□ 0.85
Csnka2ipQ8CH19 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Csnka2ipQ8CH19 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Csnka2ipQ8CH19 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Csnka2ipQ8CH19 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Csnka2ipQ8CH19 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.38■□□□□ 0.85
Csnka2ipQ8CH19 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Csnka2ipQ8CH19 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Csnka2ipQ8CH19 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Csnka2ipQ8CH19 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Csnka2ipQ8CH19 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Csnka2ipQ8CH19 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Csnka2ipQ8CH19 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Csnka2ipQ8CH19 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Csnka2ipQ8CH19 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Csnka2ipQ8CH19 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Csnka2ipQ8CH19 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.36■□□□□ 0.85
Csnka2ipQ8CH19 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Csnka2ipQ8CH19 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.36■□□□□ 0.85
Csnka2ipQ8CH19 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.36■□□□□ 0.85
Csnka2ipQ8CH19 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Csnka2ipQ8CH19 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms