Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdhr3Q8BL00 Gm32051-202ENSMUST00000197905 2385 ntBASIC19■□□□□ 0.63
Cdhr3Q8BL00 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cdhr3Q8BL00 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdhr3Q8BL00 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdhr3Q8BL00 Gm11599-201ENSMUST00000118720 878 ntBASIC18.99■□□□□ 0.63
Cdhr3Q8BL00 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdhr3Q8BL00 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdhr3Q8BL00 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdhr3Q8BL00 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdhr3Q8BL00 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdhr3Q8BL00 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdhr3Q8BL00 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdhr3Q8BL00 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdhr3Q8BL00 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdhr3Q8BL00 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cdhr3Q8BL00 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdhr3Q8BL00 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.97■□□□□ 0.63
Cdhr3Q8BL00 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.96■□□□□ 0.63
Cdhr3Q8BL00 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdhr3Q8BL00 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdhr3Q8BL00 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdhr3Q8BL00 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdhr3Q8BL00 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdhr3Q8BL00 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdhr3Q8BL00 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cdhr3Q8BL00 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdhr3Q8BL00 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdhr3Q8BL00 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cdhr3Q8BL00 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdhr3Q8BL00 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cdhr3Q8BL00 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdhr3Q8BL00 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdhr3Q8BL00 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdhr3Q8BL00 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdhr3Q8BL00 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdhr3Q8BL00 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.94■□□□□ 0.62
Cdhr3Q8BL00 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
Cdhr3Q8BL00 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cdhr3Q8BL00 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdhr3Q8BL00 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdhr3Q8BL00 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdhr3Q8BL00 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.93■□□□□ 0.62
Cdhr3Q8BL00 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdhr3Q8BL00 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdhr3Q8BL00 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdhr3Q8BL00 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdhr3Q8BL00 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cdhr3Q8BL00 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdhr3Q8BL00 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.92■□□□□ 0.62
Cdhr3Q8BL00 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdhr3Q8BL00 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdhr3Q8BL00 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cdhr3Q8BL00 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdhr3Q8BL00 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdhr3Q8BL00 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdhr3Q8BL00 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.9■□□□□ 0.62
Cdhr3Q8BL00 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdhr3Q8BL00 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cdhr3Q8BL00 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdhr3Q8BL00 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdhr3Q8BL00 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdhr3Q8BL00 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdhr3Q8BL00 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdhr3Q8BL00 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdhr3Q8BL00 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdhr3Q8BL00 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdhr3Q8BL00 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdhr3Q8BL00 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.88■□□□□ 0.61
Cdhr3Q8BL00 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdhr3Q8BL00 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.88■□□□□ 0.61
Cdhr3Q8BL00 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdhr3Q8BL00 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Cdhr3Q8BL00 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdhr3Q8BL00 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdhr3Q8BL00 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdhr3Q8BL00 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Cdhr3Q8BL00 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdhr3Q8BL00 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
Cdhr3Q8BL00 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdhr3Q8BL00 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdhr3Q8BL00 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdhr3Q8BL00 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms