Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hmbox1Q8BJA3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmbox1Q8BJA3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hmbox1Q8BJA3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Hmbox1Q8BJA3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.16■□□□□ 0.98
Hmbox1Q8BJA3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmbox1Q8BJA3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hmbox1Q8BJA3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Hmbox1Q8BJA3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Hmbox1Q8BJA3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmbox1Q8BJA3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmbox1Q8BJA3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hmbox1Q8BJA3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmbox1Q8BJA3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmbox1Q8BJA3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmbox1Q8BJA3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmbox1Q8BJA3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmbox1Q8BJA3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmbox1Q8BJA3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmbox1Q8BJA3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmbox1Q8BJA3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.12■□□□□ 0.97
Hmbox1Q8BJA3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.12■□□□□ 0.97
Hmbox1Q8BJA3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmbox1Q8BJA3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmbox1Q8BJA3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Hmbox1Q8BJA3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmbox1Q8BJA3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmbox1Q8BJA3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmbox1Q8BJA3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmbox1Q8BJA3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmbox1Q8BJA3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmbox1Q8BJA3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmbox1Q8BJA3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmbox1Q8BJA3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmbox1Q8BJA3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.11■□□□□ 0.97
Hmbox1Q8BJA3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Hmbox1Q8BJA3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.1■□□□□ 0.97
Hmbox1Q8BJA3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmbox1Q8BJA3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hmbox1Q8BJA3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Hmbox1Q8BJA3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmbox1Q8BJA3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmbox1Q8BJA3 Terc-201ENSMUST00000082862 423 ntBASIC21.09■□□□□ 0.97
Hmbox1Q8BJA3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmbox1Q8BJA3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmbox1Q8BJA3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Hmbox1Q8BJA3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hmbox1Q8BJA3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hmbox1Q8BJA3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Hmbox1Q8BJA3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmbox1Q8BJA3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.07■□□□□ 0.96
Hmbox1Q8BJA3 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.07■□□□□ 0.96
Hmbox1Q8BJA3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmbox1Q8BJA3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmbox1Q8BJA3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.07■□□□□ 0.96
Hmbox1Q8BJA3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hmbox1Q8BJA3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.06■□□□□ 0.96
Hmbox1Q8BJA3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmbox1Q8BJA3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Hmbox1Q8BJA3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmbox1Q8BJA3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hmbox1Q8BJA3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Hmbox1Q8BJA3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmbox1Q8BJA3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmbox1Q8BJA3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmbox1Q8BJA3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmbox1Q8BJA3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.03■□□□□ 0.96
Hmbox1Q8BJA3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.03■□□□□ 0.96
Hmbox1Q8BJA3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmbox1Q8BJA3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hmbox1Q8BJA3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmbox1Q8BJA3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmbox1Q8BJA3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.02■□□□□ 0.96
Hmbox1Q8BJA3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmbox1Q8BJA3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hmbox1Q8BJA3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hmbox1Q8BJA3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Hmbox1Q8BJA3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmbox1Q8BJA3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hmbox1Q8BJA3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmbox1Q8BJA3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hmbox1Q8BJA3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
Hmbox1Q8BJA3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmbox1Q8BJA3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.01■□□□□ 0.95
Hmbox1Q8BJA3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmbox1Q8BJA3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hmbox1Q8BJA3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms