Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ttc28Q80XJ3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ttc28Q80XJ3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ttc28Q80XJ3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ttc28Q80XJ3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ttc28Q80XJ3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.65■□□□□ 0.58
Ttc28Q80XJ3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ttc28Q80XJ3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ttc28Q80XJ3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ttc28Q80XJ3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.65■□□□□ 0.58
Ttc28Q80XJ3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ttc28Q80XJ3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ttc28Q80XJ3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ttc28Q80XJ3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ttc28Q80XJ3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ttc28Q80XJ3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.64■□□□□ 0.57
Ttc28Q80XJ3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ttc28Q80XJ3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ttc28Q80XJ3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ttc28Q80XJ3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.63■□□□□ 0.57
Ttc28Q80XJ3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.63■□□□□ 0.57
Ttc28Q80XJ3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.63■□□□□ 0.57
Ttc28Q80XJ3 Golgb1-201ENSMUST00000023534 498 ntBASIC18.63■□□□□ 0.57
Ttc28Q80XJ3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ttc28Q80XJ3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ttc28Q80XJ3 Gm12821-201ENSMUST00000120022 600 ntBASIC18.62■□□□□ 0.57
Ttc28Q80XJ3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ttc28Q80XJ3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ttc28Q80XJ3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ttc28Q80XJ3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
Ttc28Q80XJ3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.62■□□□□ 0.57
Ttc28Q80XJ3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Ttc28Q80XJ3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ttc28Q80XJ3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ttc28Q80XJ3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.61■□□□□ 0.57
Ttc28Q80XJ3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ttc28Q80XJ3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.61■□□□□ 0.57
Ttc28Q80XJ3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ttc28Q80XJ3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.6■□□□□ 0.57
Ttc28Q80XJ3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc28Q80XJ3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ttc28Q80XJ3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc28Q80XJ3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.6■□□□□ 0.57
Ttc28Q80XJ3 Gm10399-202ENSMUST00000202768 748 ntBASIC18.6■□□□□ 0.57
Ttc28Q80XJ3 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.6■□□□□ 0.57
Ttc28Q80XJ3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc28Q80XJ3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc28Q80XJ3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ttc28Q80XJ3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ttc28Q80XJ3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.59■□□□□ 0.57
Ttc28Q80XJ3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.59■□□□□ 0.57
Ttc28Q80XJ3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ttc28Q80XJ3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ttc28Q80XJ3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ttc28Q80XJ3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ttc28Q80XJ3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ttc28Q80XJ3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ttc28Q80XJ3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.58■□□□□ 0.57
Ttc28Q80XJ3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ttc28Q80XJ3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ttc28Q80XJ3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ttc28Q80XJ3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ttc28Q80XJ3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ttc28Q80XJ3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ttc28Q80XJ3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.57■□□□□ 0.56
Ttc28Q80XJ3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ttc28Q80XJ3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.57■□□□□ 0.56
Ttc28Q80XJ3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ttc28Q80XJ3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ttc28Q80XJ3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.56■□□□□ 0.56
Ttc28Q80XJ3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc28Q80XJ3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc28Q80XJ3 Gm45417-201ENSMUST00000209533 758 ntBASIC18.55■□□□□ 0.56
Ttc28Q80XJ3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ttc28Q80XJ3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc28Q80XJ3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc28Q80XJ3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ttc28Q80XJ3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc28Q80XJ3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc28Q80XJ3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ttc28Q80XJ3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc28Q80XJ3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc28Q80XJ3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc28Q80XJ3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc28Q80XJ3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Ttc28Q80XJ3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms