Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf220Q6PDX6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf220Q6PDX6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rnf220Q6PDX6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf220Q6PDX6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rnf220Q6PDX6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf220Q6PDX6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf220Q6PDX6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf220Q6PDX6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf220Q6PDX6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf220Q6PDX6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf220Q6PDX6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf220Q6PDX6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rnf220Q6PDX6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rnf220Q6PDX6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rnf220Q6PDX6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rnf220Q6PDX6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf220Q6PDX6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf220Q6PDX6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf220Q6PDX6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf220Q6PDX6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf220Q6PDX6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rnf220Q6PDX6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf220Q6PDX6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf220Q6PDX6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rnf220Q6PDX6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
Rnf220Q6PDX6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf220Q6PDX6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rnf220Q6PDX6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.46■□□□□ 0.87
Rnf220Q6PDX6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rnf220Q6PDX6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf220Q6PDX6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf220Q6PDX6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rnf220Q6PDX6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.46■□□□□ 0.87
Rnf220Q6PDX6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rnf220Q6PDX6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.46■□□□□ 0.87
Rnf220Q6PDX6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf220Q6PDX6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf220Q6PDX6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rnf220Q6PDX6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf220Q6PDX6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.45■□□□□ 0.86
Rnf220Q6PDX6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rnf220Q6PDX6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf220Q6PDX6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.45■□□□□ 0.86
Rnf220Q6PDX6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf220Q6PDX6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf220Q6PDX6 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.45■□□□□ 0.86
Rnf220Q6PDX6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf220Q6PDX6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf220Q6PDX6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf220Q6PDX6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf220Q6PDX6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Rnf220Q6PDX6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
Rnf220Q6PDX6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Rnf220Q6PDX6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Rnf220Q6PDX6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf220Q6PDX6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf220Q6PDX6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.43■□□□□ 0.86
Rnf220Q6PDX6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf220Q6PDX6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rnf220Q6PDX6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf220Q6PDX6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf220Q6PDX6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf220Q6PDX6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rnf220Q6PDX6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.42■□□□□ 0.86
Rnf220Q6PDX6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
Rnf220Q6PDX6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rnf220Q6PDX6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf220Q6PDX6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf220Q6PDX6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf220Q6PDX6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf220Q6PDX6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rnf220Q6PDX6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rnf220Q6PDX6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf220Q6PDX6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Rnf220Q6PDX6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf220Q6PDX6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf220Q6PDX6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf220Q6PDX6 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.39■□□□□ 0.85
Rnf220Q6PDX6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf220Q6PDX6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf220Q6PDX6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rnf220Q6PDX6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf220Q6PDX6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf220Q6PDX6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Rnf220Q6PDX6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf220Q6PDX6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf220Q6PDX6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf220Q6PDX6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Rnf220Q6PDX6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rnf220Q6PDX6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf220Q6PDX6 Nkain2-201ENSMUST00000092602 558 ntBASIC20.37■□□□□ 0.85
Rnf220Q6PDX6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf220Q6PDX6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf220Q6PDX6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Rnf220Q6PDX6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf220Q6PDX6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf220Q6PDX6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf220Q6PDX6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf220Q6PDX6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms