Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.87□□□□□ -0.03
Trav3-1Q5R1I8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC14.86□□□□□ -0.03
Trav3-1Q5R1I8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-1Q5R1I8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-1Q5R1I8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-1Q5R1I8 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.85□□□□□ -0.03
Trav3-1Q5R1I8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-1Q5R1I8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.84□□□□□ -0.03
Trav3-1Q5R1I8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-1Q5R1I8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Trav3-1Q5R1I8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Trav3-1Q5R1I8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-1Q5R1I8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-1Q5R1I8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-1Q5R1I8 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.84□□□□□ -0.03
Trav3-1Q5R1I8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-1Q5R1I8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav3-1Q5R1I8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav3-1Q5R1I8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.84□□□□□ -0.03
Trav3-1Q5R1I8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-1Q5R1I8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.83□□□□□ -0.03
Trav3-1Q5R1I8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3-1Q5R1I8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3-1Q5R1I8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav3-1Q5R1I8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3-1Q5R1I8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 Gm42699-201ENSMUST00000198104 1657 ntBASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-1Q5R1I8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-1Q5R1I8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav3-1Q5R1I8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-1Q5R1I8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-1Q5R1I8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-1Q5R1I8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-1Q5R1I8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-1Q5R1I8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav3-1Q5R1I8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-1Q5R1I8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav3-1Q5R1I8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav3-1Q5R1I8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-1Q5R1I8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-1Q5R1I8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-1Q5R1I8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-1Q5R1I8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav3-1Q5R1I8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-1Q5R1I8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-1Q5R1I8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav3-1Q5R1I8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-1Q5R1I8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-1Q5R1I8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-1Q5R1I8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav3-1Q5R1I8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-1Q5R1I8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-1Q5R1I8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-1Q5R1I8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
Trav3-1Q5R1I8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-1Q5R1I8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-1Q5R1I8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-1Q5R1I8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.78□□□□□ -0.04
Trav3-1Q5R1I8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav3-1Q5R1I8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3-1Q5R1I8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3-1Q5R1I8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3-1Q5R1I8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3-1Q5R1I8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-1Q5R1I8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-1Q5R1I8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-1Q5R1I8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-1Q5R1I8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-1Q5R1I8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav3-1Q5R1I8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-1Q5R1I8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav3-1Q5R1I8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-1Q5R1I8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-1Q5R1I8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms