Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-3Q5R1E6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.49■□□□□ 0.39
Trav6-3Q5R1E6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-3Q5R1E6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-3Q5R1E6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-3Q5R1E6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-3Q5R1E6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-3Q5R1E6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-3Q5R1E6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-3Q5R1E6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-3Q5R1E6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-3Q5R1E6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-3Q5R1E6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-3Q5R1E6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-3Q5R1E6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-3Q5R1E6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav6-3Q5R1E6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav6-3Q5R1E6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.45■□□□□ 0.38
Trav6-3Q5R1E6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-3Q5R1E6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-3Q5R1E6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav6-3Q5R1E6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav6-3Q5R1E6 Gm44428-201ENSMUST00000204474 874 ntBASIC17.45■□□□□ 0.38
Trav6-3Q5R1E6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-3Q5R1E6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-3Q5R1E6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-3Q5R1E6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-3Q5R1E6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-3Q5R1E6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav6-3Q5R1E6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.44■□□□□ 0.38
Trav6-3Q5R1E6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.44■□□□□ 0.38
Trav6-3Q5R1E6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav6-3Q5R1E6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav6-3Q5R1E6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-3Q5R1E6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-3Q5R1E6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-3Q5R1E6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-3Q5R1E6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trav6-3Q5R1E6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.43■□□□□ 0.38
Trav6-3Q5R1E6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-3Q5R1E6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-3Q5R1E6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-3Q5R1E6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-3Q5R1E6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-3Q5R1E6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-3Q5R1E6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav6-3Q5R1E6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-3Q5R1E6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav6-3Q5R1E6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-3Q5R1E6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.41■□□□□ 0.38
Trav6-3Q5R1E6 Gm6311-201ENSMUST00000073790 878 ntBASIC17.41■□□□□ 0.38
Trav6-3Q5R1E6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav6-3Q5R1E6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-3Q5R1E6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-3Q5R1E6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav6-3Q5R1E6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-3Q5R1E6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav6-3Q5R1E6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.4■□□□□ 0.38
Trav6-3Q5R1E6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-3Q5R1E6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-3Q5R1E6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-3Q5R1E6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-3Q5R1E6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-3Q5R1E6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav6-3Q5R1E6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-3Q5R1E6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-3Q5R1E6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-3Q5R1E6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.39■□□□□ 0.37
Trav6-3Q5R1E6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-3Q5R1E6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-3Q5R1E6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-3Q5R1E6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-3Q5R1E6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Trav6-3Q5R1E6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-3Q5R1E6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-3Q5R1E6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
Trav6-3Q5R1E6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-3Q5R1E6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-3Q5R1E6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-3Q5R1E6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.38■□□□□ 0.37
Trav6-3Q5R1E6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-3Q5R1E6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-3Q5R1E6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav6-3Q5R1E6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Trav6-3Q5R1E6 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms