Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Clhc1Q5M6W3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clhc1Q5M6W3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clhc1Q5M6W3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Clhc1Q5M6W3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clhc1Q5M6W3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clhc1Q5M6W3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clhc1Q5M6W3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clhc1Q5M6W3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clhc1Q5M6W3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clhc1Q5M6W3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clhc1Q5M6W3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.86■□□□□ 0.93
Clhc1Q5M6W3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clhc1Q5M6W3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clhc1Q5M6W3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clhc1Q5M6W3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clhc1Q5M6W3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Clhc1Q5M6W3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clhc1Q5M6W3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Clhc1Q5M6W3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clhc1Q5M6W3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clhc1Q5M6W3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clhc1Q5M6W3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.84■□□□□ 0.93
Clhc1Q5M6W3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clhc1Q5M6W3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clhc1Q5M6W3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
Clhc1Q5M6W3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Clhc1Q5M6W3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clhc1Q5M6W3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clhc1Q5M6W3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clhc1Q5M6W3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.84■□□□□ 0.93
Clhc1Q5M6W3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Clhc1Q5M6W3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.83■□□□□ 0.93
Clhc1Q5M6W3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clhc1Q5M6W3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clhc1Q5M6W3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Clhc1Q5M6W3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clhc1Q5M6W3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clhc1Q5M6W3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clhc1Q5M6W3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clhc1Q5M6W3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clhc1Q5M6W3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clhc1Q5M6W3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Clhc1Q5M6W3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clhc1Q5M6W3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clhc1Q5M6W3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clhc1Q5M6W3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clhc1Q5M6W3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clhc1Q5M6W3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clhc1Q5M6W3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clhc1Q5M6W3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clhc1Q5M6W3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clhc1Q5M6W3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clhc1Q5M6W3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clhc1Q5M6W3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Clhc1Q5M6W3 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.8■□□□□ 0.92
Clhc1Q5M6W3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clhc1Q5M6W3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.8■□□□□ 0.92
Clhc1Q5M6W3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.8■□□□□ 0.92
Clhc1Q5M6W3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Clhc1Q5M6W3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clhc1Q5M6W3 Gm4799-201ENSMUST00000095396 657 ntBASIC20.79■□□□□ 0.92
Clhc1Q5M6W3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Clhc1Q5M6W3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clhc1Q5M6W3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clhc1Q5M6W3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clhc1Q5M6W3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clhc1Q5M6W3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clhc1Q5M6W3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.78■□□□□ 0.92
Clhc1Q5M6W3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clhc1Q5M6W3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clhc1Q5M6W3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clhc1Q5M6W3 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.77■□□□□ 0.92
Clhc1Q5M6W3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clhc1Q5M6W3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.77■□□□□ 0.92
Clhc1Q5M6W3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clhc1Q5M6W3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clhc1Q5M6W3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.77■□□□□ 0.92
Clhc1Q5M6W3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clhc1Q5M6W3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clhc1Q5M6W3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Clhc1Q5M6W3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clhc1Q5M6W3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clhc1Q5M6W3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.76■□□□□ 0.91
Clhc1Q5M6W3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clhc1Q5M6W3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clhc1Q5M6W3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.75■□□□□ 0.91
Clhc1Q5M6W3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clhc1Q5M6W3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clhc1Q5M6W3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clhc1Q5M6W3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clhc1Q5M6W3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.75■□□□□ 0.91
Clhc1Q5M6W3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.75■□□□□ 0.91
Clhc1Q5M6W3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Clhc1Q5M6W3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clhc1Q5M6W3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.74■□□□□ 0.91
Clhc1Q5M6W3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Clhc1Q5M6W3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.74■□□□□ 0.91
Clhc1Q5M6W3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.74■□□□□ 0.91
Clhc1Q5M6W3 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms