Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gm45444-201ENSMUST00000211394 898 ntBASIC20.57■□□□□ 0.88
Khdc4Q3TCX3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Khdc4Q3TCX3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Khdc4Q3TCX3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.56■□□□□ 0.88
Khdc4Q3TCX3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Khdc4Q3TCX3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Khdc4Q3TCX3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Khdc4Q3TCX3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Khdc4Q3TCX3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Khdc4Q3TCX3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Khdc4Q3TCX3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc4Q3TCX3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Khdc4Q3TCX3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Khdc4Q3TCX3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.55■□□□□ 0.88
Khdc4Q3TCX3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.55■□□□□ 0.88
Khdc4Q3TCX3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc4Q3TCX3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc4Q3TCX3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc4Q3TCX3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc4Q3TCX3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc4Q3TCX3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Khdc4Q3TCX3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Khdc4Q3TCX3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Khdc4Q3TCX3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.54■□□□□ 0.88
Khdc4Q3TCX3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Khdc4Q3TCX3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.54■□□□□ 0.88
Khdc4Q3TCX3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Khdc4Q3TCX3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Khdc4Q3TCX3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Khdc4Q3TCX3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Khdc4Q3TCX3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.53■□□□□ 0.88
Khdc4Q3TCX3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.53■□□□□ 0.88
Khdc4Q3TCX3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Khdc4Q3TCX3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Khdc4Q3TCX3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Khdc4Q3TCX3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Khdc4Q3TCX3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Khdc4Q3TCX3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Khdc4Q3TCX3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Khdc4Q3TCX3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Khdc4Q3TCX3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Khdc4Q3TCX3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Khdc4Q3TCX3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Khdc4Q3TCX3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.51■□□□□ 0.87
Khdc4Q3TCX3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Khdc4Q3TCX3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Khdc4Q3TCX3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Khdc4Q3TCX3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.51■□□□□ 0.87
Khdc4Q3TCX3 Rps24-207ENSMUST00000224568 714 ntBASIC20.51■□□□□ 0.87
Khdc4Q3TCX3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Khdc4Q3TCX3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Khdc4Q3TCX3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Khdc4Q3TCX3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Khdc4Q3TCX3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Khdc4Q3TCX3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Khdc4Q3TCX3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Khdc4Q3TCX3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Khdc4Q3TCX3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc4Q3TCX3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc4Q3TCX3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc4Q3TCX3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc4Q3TCX3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc4Q3TCX3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.49■□□□□ 0.87
Khdc4Q3TCX3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc4Q3TCX3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.49■□□□□ 0.87
Khdc4Q3TCX3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Khdc4Q3TCX3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Khdc4Q3TCX3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
Khdc4Q3TCX3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Khdc4Q3TCX3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Khdc4Q3TCX3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Khdc4Q3TCX3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Khdc4Q3TCX3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc4Q3TCX3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc4Q3TCX3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Khdc4Q3TCX3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc4Q3TCX3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc4Q3TCX3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc4Q3TCX3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc4Q3TCX3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc4Q3TCX3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.47■□□□□ 0.87
Khdc4Q3TCX3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Khdc4Q3TCX3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Khdc4Q3TCX3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Khdc4Q3TCX3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Khdc4Q3TCX3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Khdc4Q3TCX3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Khdc4Q3TCX3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Khdc4Q3TCX3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Khdc4Q3TCX3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Khdc4Q3TCX3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.45■□□□□ 0.86
Khdc4Q3TCX3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.45■□□□□ 0.86
Khdc4Q3TCX3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Khdc4Q3TCX3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Khdc4Q3TCX3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
Khdc4Q3TCX3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Khdc4Q3TCX3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Khdc4Q3TCX3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Khdc4Q3TCX3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Khdc4Q3TCX3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms