Protein–RNA interactions for Protein: Q3TC46

Patl1, Protein PAT1 homolog 1, mousemouse

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Patl1Q3TC46 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Patl1Q3TC46 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Patl1Q3TC46 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.61■□□□□ 0.89
Patl1Q3TC46 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Patl1Q3TC46 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Patl1Q3TC46 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Patl1Q3TC46 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Patl1Q3TC46 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Patl1Q3TC46 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.6■□□□□ 0.89
Patl1Q3TC46 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Patl1Q3TC46 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Patl1Q3TC46 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Patl1Q3TC46 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Patl1Q3TC46 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Patl1Q3TC46 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.59■□□□□ 0.89
Patl1Q3TC46 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Patl1Q3TC46 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Patl1Q3TC46 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Patl1Q3TC46 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Patl1Q3TC46 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Patl1Q3TC46 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Patl1Q3TC46 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Patl1Q3TC46 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Patl1Q3TC46 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.58■□□□□ 0.89
Patl1Q3TC46 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Patl1Q3TC46 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Patl1Q3TC46 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Patl1Q3TC46 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Patl1Q3TC46 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Patl1Q3TC46 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Patl1Q3TC46 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Patl1Q3TC46 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Patl1Q3TC46 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Patl1Q3TC46 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Patl1Q3TC46 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.56■□□□□ 0.88
Patl1Q3TC46 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Patl1Q3TC46 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Patl1Q3TC46 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Patl1Q3TC46 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Patl1Q3TC46 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Patl1Q3TC46 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Patl1Q3TC46 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Patl1Q3TC46 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Patl1Q3TC46 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Patl1Q3TC46 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Patl1Q3TC46 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Patl1Q3TC46 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Patl1Q3TC46 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Patl1Q3TC46 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Patl1Q3TC46 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Patl1Q3TC46 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Patl1Q3TC46 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Patl1Q3TC46 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Patl1Q3TC46 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Patl1Q3TC46 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Patl1Q3TC46 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
Patl1Q3TC46 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.52■□□□□ 0.88
Patl1Q3TC46 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Patl1Q3TC46 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Patl1Q3TC46 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Patl1Q3TC46 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Patl1Q3TC46 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Patl1Q3TC46 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.5■□□□□ 0.87
Patl1Q3TC46 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Patl1Q3TC46 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Patl1Q3TC46 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Patl1Q3TC46 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Patl1Q3TC46 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Patl1Q3TC46 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Patl1Q3TC46 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Patl1Q3TC46 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Patl1Q3TC46 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Patl1Q3TC46 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Patl1Q3TC46 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.48■□□□□ 0.87
Patl1Q3TC46 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.48■□□□□ 0.87
Patl1Q3TC46 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Patl1Q3TC46 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.47■□□□□ 0.87
Patl1Q3TC46 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Patl1Q3TC46 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Patl1Q3TC46 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Patl1Q3TC46 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Patl1Q3TC46 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Patl1Q3TC46 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Patl1Q3TC46 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Patl1Q3TC46 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.46■□□□□ 0.87
Patl1Q3TC46 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Patl1Q3TC46 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Patl1Q3TC46 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Patl1Q3TC46 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.46■□□□□ 0.87
Patl1Q3TC46 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.45■□□□□ 0.86
Patl1Q3TC46 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Patl1Q3TC46 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Patl1Q3TC46 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Patl1Q3TC46 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Patl1Q3TC46 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Patl1Q3TC46 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Patl1Q3TC46 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Patl1Q3TC46 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Patl1Q3TC46 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Patl1Q3TC46 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms