Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1aP97445 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1aP97445 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1aP97445 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1aP97445 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.23■□□□□ 0.83
Cacna1aP97445 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1aP97445 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cacna1aP97445 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.22■□□□□ 0.83
Cacna1aP97445 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacna1aP97445 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacna1aP97445 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.22■□□□□ 0.83
Cacna1aP97445 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1aP97445 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Cacna1aP97445 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1aP97445 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.21■□□□□ 0.83
Cacna1aP97445 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1aP97445 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1aP97445 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1aP97445 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1aP97445 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1aP97445 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1aP97445 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1aP97445 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1aP97445 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.19■□□□□ 0.82
Cacna1aP97445 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1aP97445 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1aP97445 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Cacna1aP97445 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.18■□□□□ 0.82
Cacna1aP97445 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.18■□□□□ 0.82
Cacna1aP97445 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1aP97445 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1aP97445 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1aP97445 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Cacna1aP97445 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1aP97445 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cacna1aP97445 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.17■□□□□ 0.82
Cacna1aP97445 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.17■□□□□ 0.82
Cacna1aP97445 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1aP97445 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1aP97445 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1aP97445 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1aP97445 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1aP97445 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1aP97445 Gm27454-201ENSMUST00000185090 204 ntBASIC20.16■□□□□ 0.82
Cacna1aP97445 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1aP97445 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1aP97445 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1aP97445 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1aP97445 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.15■□□□□ 0.82
Cacna1aP97445 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1aP97445 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cacna1aP97445 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1aP97445 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cacna1aP97445 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cacna1aP97445 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.14■□□□□ 0.82
Cacna1aP97445 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cacna1aP97445 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cacna1aP97445 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.14■□□□□ 0.81
Cacna1aP97445 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cacna1aP97445 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cacna1aP97445 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cacna1aP97445 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cacna1aP97445 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.13■□□□□ 0.81
Cacna1aP97445 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.13■□□□□ 0.81
Cacna1aP97445 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1aP97445 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1aP97445 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.13■□□□□ 0.81
Cacna1aP97445 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.13■□□□□ 0.81
Cacna1aP97445 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cacna1aP97445 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.13■□□□□ 0.81
Cacna1aP97445 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1aP97445 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.12■□□□□ 0.81
Cacna1aP97445 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1aP97445 Gm8495-201ENSMUST00000188740 694 ntBASIC20.12■□□□□ 0.81
Cacna1aP97445 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1aP97445 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cacna1aP97445 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1aP97445 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1aP97445 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.12■□□□□ 0.81
Cacna1aP97445 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cacna1aP97445 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cacna1aP97445 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Cacna1aP97445 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cacna1aP97445 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cacna1aP97445 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.11■□□□□ 0.81
Cacna1aP97445 Gm45417-201ENSMUST00000209533 758 ntBASIC20.11■□□□□ 0.81
Cacna1aP97445 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cacna1aP97445 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cacna1aP97445 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cacna1aP97445 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cacna1aP97445 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cacna1aP97445 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cacna1aP97445 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.1■□□□□ 0.81
Cacna1aP97445 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cacna1aP97445 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cacna1aP97445 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cacna1aP97445 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.1■□□□□ 0.81
Cacna1aP97445 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cacna1aP97445 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cacna1aP97445 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms