Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sox2P48432 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox2P48432 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox2P48432 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sox2P48432 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox2P48432 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox2P48432 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox2P48432 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sox2P48432 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox2P48432 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Sox2P48432 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.32■□□□□ 0.84
Sox2P48432 Gm4799-201ENSMUST00000095396 657 ntBASIC20.32■□□□□ 0.84
Sox2P48432 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.32■□□□□ 0.84
Sox2P48432 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Sox2P48432 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox2P48432 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox2P48432 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sox2P48432 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox2P48432 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.31■□□□□ 0.84
Sox2P48432 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Sox2P48432 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.31■□□□□ 0.84
Sox2P48432 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox2P48432 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.3■□□□□ 0.84
Sox2P48432 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
Sox2P48432 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
Sox2P48432 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox2P48432 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sox2P48432 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox2P48432 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Sox2P48432 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.29■□□□□ 0.84
Sox2P48432 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox2P48432 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox2P48432 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox2P48432 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Sox2P48432 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox2P48432 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox2P48432 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Sox2P48432 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox2P48432 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox2P48432 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox2P48432 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.27■□□□□ 0.84
Sox2P48432 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox2P48432 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.27■□□□□ 0.84
Sox2P48432 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sox2P48432 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.26■□□□□ 0.83
Sox2P48432 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sox2P48432 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox2P48432 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox2P48432 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Sox2P48432 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Sox2P48432 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox2P48432 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sox2P48432 Gm9812-201ENSMUST00000061934 968 ntBASIC20.25■□□□□ 0.83
Sox2P48432 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sox2P48432 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Sox2P48432 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sox2P48432 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.24■□□□□ 0.83
Sox2P48432 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox2P48432 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox2P48432 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.24■□□□□ 0.83
Sox2P48432 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox2P48432 Gm22567-201ENSMUST00000175542 342 ntBASIC20.24■□□□□ 0.83
Sox2P48432 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.24■□□□□ 0.83
Sox2P48432 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.24■□□□□ 0.83
Sox2P48432 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
Sox2P48432 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox2P48432 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox2P48432 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sox2P48432 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.24■□□□□ 0.83
Sox2P48432 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.24■□□□□ 0.83
Sox2P48432 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox2P48432 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox2P48432 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox2P48432 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox2P48432 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.23■□□□□ 0.83
Sox2P48432 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sox2P48432 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Sox2P48432 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox2P48432 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.23■□□□□ 0.83
Sox2P48432 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Sox2P48432 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox2P48432 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sox2P48432 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox2P48432 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sox2P48432 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sox2P48432 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox2P48432 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.21■□□□□ 0.83
Sox2P48432 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
Sox2P48432 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sox2P48432 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sox2P48432 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sox2P48432 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox2P48432 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox2P48432 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
Sox2P48432 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox2P48432 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox2P48432 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.2■□□□□ 0.82
Sox2P48432 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox2P48432 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox2P48432 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms