Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vps4bP46467 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vps4bP46467 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.01■■□□□ 1.11
Vps4bP46467 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Vps4bP46467 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Vps4bP46467 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22■■□□□ 1.11
Vps4bP46467 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22■■□□□ 1.11
Vps4bP46467 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Vps4bP46467 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22■■□□□ 1.11
Vps4bP46467 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vps4bP46467 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vps4bP46467 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22■■□□□ 1.11
Vps4bP46467 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22■■□□□ 1.11
Vps4bP46467 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Vps4bP46467 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Vps4bP46467 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Vps4bP46467 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.99■■□□□ 1.11
Vps4bP46467 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps4bP46467 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.98■■□□□ 1.11
Vps4bP46467 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Vps4bP46467 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Vps4bP46467 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Vps4bP46467 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps4bP46467 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Vps4bP46467 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
Vps4bP46467 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Vps4bP46467 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Vps4bP46467 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps4bP46467 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Vps4bP46467 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps4bP46467 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.95■■□□□ 1.1
Vps4bP46467 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Vps4bP46467 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps4bP46467 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps4bP46467 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps4bP46467 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps4bP46467 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Vps4bP46467 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.94■■□□□ 1.1
Vps4bP46467 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps4bP46467 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps4bP46467 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
Vps4bP46467 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps4bP46467 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps4bP46467 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps4bP46467 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps4bP46467 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.92■■□□□ 1.1
Vps4bP46467 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Vps4bP46467 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.92■■□□□ 1.1
Vps4bP46467 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps4bP46467 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps4bP46467 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps4bP46467 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Vps4bP46467 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Vps4bP46467 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.91■■□□□ 1.1
Vps4bP46467 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps4bP46467 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps4bP46467 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.91■■□□□ 1.1
Vps4bP46467 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Vps4bP46467 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps4bP46467 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps4bP46467 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Vps4bP46467 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vps4bP46467 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vps4bP46467 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.89■■□□□ 1.09
Vps4bP46467 Gm9806-201ENSMUST00000051080 552 ntBASIC21.89■■□□□ 1.09
Vps4bP46467 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Vps4bP46467 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Vps4bP46467 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Vps4bP46467 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Vps4bP46467 Scarna2-201ENSMUST00000157560 414 ntBASIC21.88■■□□□ 1.09
Vps4bP46467 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps4bP46467 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps4bP46467 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps4bP46467 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps4bP46467 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps4bP46467 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.87■■□□□ 1.09
Vps4bP46467 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps4bP46467 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Vps4bP46467 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps4bP46467 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.87■■□□□ 1.09
Vps4bP46467 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps4bP46467 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps4bP46467 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps4bP46467 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Vps4bP46467 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Vps4bP46467 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.86■■□□□ 1.09
Vps4bP46467 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps4bP46467 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps4bP46467 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.85■■□□□ 1.09
Vps4bP46467 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Vps4bP46467 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps4bP46467 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps4bP46467 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps4bP46467 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps4bP46467 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps4bP46467 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps4bP46467 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.84■■□□□ 1.09
Vps4bP46467 Gm16437-201ENSMUST00000025669 507 ntBASIC21.84■■□□□ 1.09
Vps4bP46467 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps4bP46467 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms