Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.66■□□□□ 0.58
Slc6a1P31648 Gm30023-201ENSMUST00000197970 889 ntBASIC18.66■□□□□ 0.58
Slc6a1P31648 Gm7432-201ENSMUST00000210343 879 ntBASIC18.66■□□□□ 0.58
Slc6a1P31648 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a1P31648 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a1P31648 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a1P31648 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a1P31648 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a1P31648 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a1P31648 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a1P31648 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a1P31648 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.64■□□□□ 0.57
Slc6a1P31648 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Slc6a1P31648 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a1P31648 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.63■□□□□ 0.57
Slc6a1P31648 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Slc6a1P31648 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a1P31648 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a1P31648 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a1P31648 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a1P31648 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.62■□□□□ 0.57
Slc6a1P31648 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a1P31648 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a1P31648 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a1P31648 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a1P31648 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a1P31648 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a1P31648 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a1P31648 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a1P31648 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a1P31648 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Slc6a1P31648 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a1P31648 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Slc6a1P31648 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.6■□□□□ 0.57
Slc6a1P31648 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.6■□□□□ 0.57
Slc6a1P31648 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Slc6a1P31648 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Slc6a1P31648 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a1P31648 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a1P31648 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Slc6a1P31648 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a1P31648 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Slc6a1P31648 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a1P31648 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a1P31648 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.58■□□□□ 0.57
Slc6a1P31648 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a1P31648 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a1P31648 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
Slc6a1P31648 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.58■□□□□ 0.56
Slc6a1P31648 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a1P31648 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a1P31648 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a1P31648 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a1P31648 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a1P31648 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Slc6a1P31648 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a1P31648 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Slc6a1P31648 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a1P31648 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc6a1P31648 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a1P31648 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a1P31648 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a1P31648 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc6a1P31648 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Slc6a1P31648 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a1P31648 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a1P31648 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a1P31648 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a1P31648 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.55■□□□□ 0.56
Slc6a1P31648 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Slc6a1P31648 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc6a1P31648 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a1P31648 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a1P31648 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a1P31648 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.54■□□□□ 0.56
Slc6a1P31648 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Slc6a1P31648 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Slc6a1P31648 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a1P31648 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.54■□□□□ 0.56
Slc6a1P31648 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc6a1P31648 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a1P31648 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a1P31648 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a1P31648 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a1P31648 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.53■□□□□ 0.56
Slc6a1P31648 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc6a1P31648 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.53■□□□□ 0.56
Slc6a1P31648 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a1P31648 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a1P31648 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.52■□□□□ 0.56
Slc6a1P31648 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.52■□□□□ 0.56
Slc6a1P31648 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Slc6a1P31648 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.52■□□□□ 0.56
Slc6a1P31648 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.52■□□□□ 0.56
Slc6a1P31648 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a1P31648 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc6a1P31648 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Slc6a1P31648 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.52■□□□□ 0.55
Slc6a1P31648 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a1P31648 Gm11599-201ENSMUST00000118720 878 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms