Protein–RNA interactions for Protein: P09079

Hoxb5, Homeobox protein Hox-B5, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb5P09079 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Hoxb5P09079 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxb5P09079 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxb5P09079 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxb5P09079 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxb5P09079 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.22■□□□□ 0.51
Hoxb5P09079 Gm37136-201ENSMUST00000194368 194 ntBASIC18.22■□□□□ 0.51
Hoxb5P09079 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxb5P09079 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxb5P09079 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxb5P09079 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxb5P09079 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxb5P09079 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Hoxb5P09079 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxb5P09079 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.21■□□□□ 0.51
Hoxb5P09079 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxb5P09079 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.21■□□□□ 0.51
Hoxb5P09079 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxb5P09079 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Hoxb5P09079 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxb5P09079 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxb5P09079 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxb5P09079 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.2■□□□□ 0.5
Hoxb5P09079 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
Hoxb5P09079 Gm45855-201ENSMUST00000212546 880 ntBASIC18.2■□□□□ 0.5
Hoxb5P09079 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxb5P09079 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxb5P09079 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxb5P09079 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxb5P09079 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxb5P09079 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxb5P09079 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxb5P09079 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxb5P09079 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxb5P09079 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxb5P09079 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxb5P09079 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxb5P09079 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxb5P09079 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxb5P09079 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.18■□□□□ 0.5
Hoxb5P09079 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxb5P09079 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.18■□□□□ 0.5
Hoxb5P09079 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxb5P09079 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxb5P09079 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxb5P09079 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxb5P09079 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxb5P09079 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxb5P09079 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxb5P09079 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxb5P09079 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxb5P09079 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxb5P09079 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxb5P09079 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxb5P09079 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.16■□□□□ 0.5
Hoxb5P09079 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxb5P09079 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxb5P09079 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Hoxb5P09079 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hoxb5P09079 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxb5P09079 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxb5P09079 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hoxb5P09079 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxb5P09079 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxb5P09079 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Hoxb5P09079 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.15■□□□□ 0.5
Hoxb5P09079 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxb5P09079 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Hoxb5P09079 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxb5P09079 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxb5P09079 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxb5P09079 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Hoxb5P09079 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxb5P09079 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Hoxb5P09079 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Hoxb5P09079 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.13■□□□□ 0.49
Hoxb5P09079 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxb5P09079 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxb5P09079 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.13■□□□□ 0.49
Hoxb5P09079 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxb5P09079 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hoxb5P09079 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxb5P09079 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxb5P09079 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxb5P09079 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.12■□□□□ 0.49
Hoxb5P09079 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.12■□□□□ 0.49
Hoxb5P09079 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxb5P09079 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
Hoxb5P09079 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.11■□□□□ 0.49
Hoxb5P09079 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxb5P09079 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.11■□□□□ 0.49
Hoxb5P09079 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.11■□□□□ 0.49
Hoxb5P09079 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxb5P09079 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxb5P09079 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Hoxb5P09079 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hoxb5P09079 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxb5P09079 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hoxb5P09079 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Hoxb5P09079 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms