Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a2P08122 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Col4a2P08122 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.78■□□□□ 0.92
Col4a2P08122 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.78■□□□□ 0.92
Col4a2P08122 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Col4a2P08122 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.77■□□□□ 0.92
Col4a2P08122 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Col4a2P08122 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a2P08122 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a2P08122 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.76■□□□□ 0.91
Col4a2P08122 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.76■□□□□ 0.91
Col4a2P08122 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a2P08122 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a2P08122 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.75■□□□□ 0.91
Col4a2P08122 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a2P08122 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a2P08122 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a2P08122 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a2P08122 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.75■□□□□ 0.91
Col4a2P08122 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a2P08122 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a2P08122 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a2P08122 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Col4a2P08122 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a2P08122 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a2P08122 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a2P08122 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a2P08122 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a2P08122 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Col4a2P08122 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a2P08122 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a2P08122 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a2P08122 Etf1-202ENSMUST00000180351 108 ntBASIC20.73■□□□□ 0.91
Col4a2P08122 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a2P08122 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a2P08122 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Col4a2P08122 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.72■□□□□ 0.91
Col4a2P08122 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a2P08122 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a2P08122 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a2P08122 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a2P08122 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.7■□□□□ 0.9
Col4a2P08122 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Col4a2P08122 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a2P08122 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.7■□□□□ 0.9
Col4a2P08122 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a2P08122 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a2P08122 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a2P08122 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.7■□□□□ 0.9
Col4a2P08122 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.7■□□□□ 0.9
Col4a2P08122 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a2P08122 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Col4a2P08122 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a2P08122 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a2P08122 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.69■□□□□ 0.9
Col4a2P08122 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a2P08122 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a2P08122 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a2P08122 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a2P08122 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a2P08122 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.67■□□□□ 0.9
Col4a2P08122 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Col4a2P08122 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Col4a2P08122 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.67■□□□□ 0.9
Col4a2P08122 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a2P08122 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a2P08122 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a2P08122 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.66■□□□□ 0.9
Col4a2P08122 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a2P08122 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a2P08122 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a2P08122 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.65■□□□□ 0.9
Col4a2P08122 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a2P08122 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a2P08122 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a2P08122 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Col4a2P08122 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.64■□□□□ 0.9
Col4a2P08122 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.64■□□□□ 0.9
Col4a2P08122 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col4a2P08122 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.64■□□□□ 0.9
Col4a2P08122 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a2P08122 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Col4a2P08122 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a2P08122 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a2P08122 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.64■□□□□ 0.89
Col4a2P08122 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.64■□□□□ 0.89
Col4a2P08122 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a2P08122 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a2P08122 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.63■□□□□ 0.89
Col4a2P08122 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a2P08122 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a2P08122 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a2P08122 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a2P08122 Gm21956-201ENSMUST00000179946 522 ntBASIC20.62■□□□□ 0.89
Col4a2P08122 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a2P08122 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a2P08122 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a2P08122 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a2P08122 Gm13241-201ENSMUST00000094493 780 ntBASIC20.61■□□□□ 0.89
Col4a2P08122 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms