Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04213 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
P04213 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.97■□□□□ 0.95
P04213 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
P04213 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
P04213 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04213 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04213 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04213 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04213 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04213 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04213 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04213 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.96■□□□□ 0.95
P04213 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
P04213 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
P04213 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
P04213 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04213 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04213 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04213 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04213 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04213 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P04213 Gm11687-201ENSMUST00000118911 886 ntBASIC20.94■□□□□ 0.94
P04213 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
P04213 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
P04213 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P04213 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04213 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.93■□□□□ 0.94
P04213 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
P04213 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04213 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
P04213 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04213 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04213 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
P04213 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.92■□□□□ 0.94
P04213 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
P04213 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P04213 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P04213 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
P04213 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.91■□□□□ 0.94
P04213 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
P04213 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P04213 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04213 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.9■□□□□ 0.94
P04213 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04213 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04213 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04213 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
P04213 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
P04213 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
P04213 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.89■□□□□ 0.93
P04213 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P04213 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.89■□□□□ 0.93
P04213 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.89■□□□□ 0.93
P04213 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
P04213 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P04213 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04213 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04213 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04213 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.88■□□□□ 0.93
P04213 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
P04213 Gm11175-201ENSMUST00000116172 543 ntBASIC20.88■□□□□ 0.93
P04213 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04213 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.88■□□□□ 0.93
P04213 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04213 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04213 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.87■□□□□ 0.93
P04213 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04213 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04213 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
P04213 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04213 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04213 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04213 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
P04213 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.86■□□□□ 0.93
P04213 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
P04213 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.86■□□□□ 0.93
P04213 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04213 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04213 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
P04213 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04213 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04213 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
P04213 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04213 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.84■□□□□ 0.93
P04213 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.84■□□□□ 0.93
P04213 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04213 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04213 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
P04213 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.83■□□□□ 0.92
P04213 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.83■□□□□ 0.92
P04213 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
P04213 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04213 Gm27502-201ENSMUST00000183495 199 ntBASIC20.82■□□□□ 0.92
P04213 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.82■□□□□ 0.92
P04213 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
P04213 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P04213 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04213 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04213 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms