Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Notumos-201ENSMUST00000151998 2659 ntBASIC20.59■□□□□ 0.89
ClockO08785 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ClockO08785 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ClockO08785 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ClockO08785 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ClockO08785 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.58■□□□□ 0.89
ClockO08785 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ClockO08785 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.58■□□□□ 0.89
ClockO08785 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.58■□□□□ 0.88
ClockO08785 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ClockO08785 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClockO08785 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClockO08785 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClockO08785 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClockO08785 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClockO08785 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ClockO08785 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ClockO08785 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.56■□□□□ 0.88
ClockO08785 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ClockO08785 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.56■□□□□ 0.88
ClockO08785 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ClockO08785 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ClockO08785 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ClockO08785 Nkain2-201ENSMUST00000092602 558 ntBASIC20.55■□□□□ 0.88
ClockO08785 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ClockO08785 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ClockO08785 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ClockO08785 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ClockO08785 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ClockO08785 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ClockO08785 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ClockO08785 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ClockO08785 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ClockO08785 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ClockO08785 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ClockO08785 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClockO08785 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ClockO08785 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.53■□□□□ 0.88
ClockO08785 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClockO08785 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
ClockO08785 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClockO08785 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ClockO08785 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ClockO08785 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ClockO08785 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ClockO08785 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ClockO08785 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ClockO08785 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.51■□□□□ 0.87
ClockO08785 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ClockO08785 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ClockO08785 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
ClockO08785 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ClockO08785 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ClockO08785 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ClockO08785 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ClockO08785 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ClockO08785 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClockO08785 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ClockO08785 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.49■□□□□ 0.87
ClockO08785 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClockO08785 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClockO08785 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ClockO08785 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClockO08785 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClockO08785 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.48■□□□□ 0.87
ClockO08785 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
ClockO08785 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.47■□□□□ 0.87
ClockO08785 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ClockO08785 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.47■□□□□ 0.87
ClockO08785 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.47■□□□□ 0.87
ClockO08785 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ClockO08785 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ClockO08785 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ClockO08785 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ClockO08785 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ClockO08785 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.46■□□□□ 0.87
ClockO08785 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
ClockO08785 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
ClockO08785 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.45■□□□□ 0.86
ClockO08785 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ClockO08785 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ClockO08785 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ClockO08785 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ClockO08785 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ClockO08785 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ClockO08785 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ClockO08785 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.44■□□□□ 0.86
ClockO08785 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.44■□□□□ 0.86
ClockO08785 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ClockO08785 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ClockO08785 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ClockO08785 Gm22567-201ENSMUST00000175542 342 ntBASIC20.43■□□□□ 0.86
ClockO08785 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ClockO08785 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.43■□□□□ 0.86
ClockO08785 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClockO08785 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClockO08785 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ClockO08785 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ClockO08785 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClockO08785 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms