Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raet1cO08604 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Raet1cO08604 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1cO08604 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1cO08604 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Raet1cO08604 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1cO08604 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1cO08604 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Raet1cO08604 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1cO08604 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1cO08604 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1cO08604 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1cO08604 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Raet1cO08604 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Raet1cO08604 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Raet1cO08604 Gm27502-201ENSMUST00000183495 199 ntBASIC19.39■□□□□ 0.69
Raet1cO08604 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raet1cO08604 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raet1cO08604 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.39■□□□□ 0.69
Raet1cO08604 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raet1cO08604 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Raet1cO08604 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Raet1cO08604 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Raet1cO08604 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Raet1cO08604 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.38■□□□□ 0.69
Raet1cO08604 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Raet1cO08604 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Raet1cO08604 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Raet1cO08604 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Raet1cO08604 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Raet1cO08604 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.37■□□□□ 0.69
Raet1cO08604 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Raet1cO08604 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Raet1cO08604 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Raet1cO08604 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Raet1cO08604 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Raet1cO08604 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Raet1cO08604 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.36■□□□□ 0.69
Raet1cO08604 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Raet1cO08604 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Raet1cO08604 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Raet1cO08604 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Raet1cO08604 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Raet1cO08604 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.35■□□□□ 0.69
Raet1cO08604 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Raet1cO08604 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Raet1cO08604 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Raet1cO08604 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.35■□□□□ 0.69
Raet1cO08604 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Raet1cO08604 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.34■□□□□ 0.69
Raet1cO08604 Gm22567-201ENSMUST00000175542 342 ntBASIC19.34■□□□□ 0.69
Raet1cO08604 Mir6538-201ENSMUST00000183713 110 ntBASIC19.34■□□□□ 0.69
Raet1cO08604 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Raet1cO08604 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.34■□□□□ 0.69
Raet1cO08604 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Raet1cO08604 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Raet1cO08604 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Raet1cO08604 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Raet1cO08604 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Raet1cO08604 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Raet1cO08604 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Raet1cO08604 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Raet1cO08604 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.33■□□□□ 0.68
Raet1cO08604 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Raet1cO08604 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Raet1cO08604 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Raet1cO08604 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Raet1cO08604 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Raet1cO08604 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Raet1cO08604 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Raet1cO08604 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Raet1cO08604 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Raet1cO08604 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Raet1cO08604 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Raet1cO08604 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Raet1cO08604 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Raet1cO08604 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.31■□□□□ 0.68
Raet1cO08604 Gm14523-201ENSMUST00000117260 558 ntBASIC19.31■□□□□ 0.68
Raet1cO08604 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Raet1cO08604 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Raet1cO08604 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Raet1cO08604 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Raet1cO08604 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Raet1cO08604 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Raet1cO08604 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Raet1cO08604 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Raet1cO08604 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Raet1cO08604 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Raet1cO08604 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Raet1cO08604 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Raet1cO08604 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Raet1cO08604 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.28■□□□□ 0.68
Raet1cO08604 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Raet1cO08604 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Raet1cO08604 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Raet1cO08604 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Raet1cO08604 Gm7332-201ENSMUST00000118351 454 ntBASIC19.27■□□□□ 0.68
Raet1cO08604 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.27■□□□□ 0.68
Raet1cO08604 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Raet1cO08604 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms