Protein–RNA interactions for Protein: J3QP08

H2al1k, Histone H2A, mousemouse

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1kJ3QP08 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al1kJ3QP08 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al1kJ3QP08 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al1kJ3QP08 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2al1kJ3QP08 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al1kJ3QP08 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al1kJ3QP08 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al1kJ3QP08 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2al1kJ3QP08 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H2al1kJ3QP08 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al1kJ3QP08 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2al1kJ3QP08 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al1kJ3QP08 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
H2al1kJ3QP08 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al1kJ3QP08 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
H2al1kJ3QP08 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
H2al1kJ3QP08 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC12.74□□□□□ -0.37
H2al1kJ3QP08 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al1kJ3QP08 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al1kJ3QP08 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2al1kJ3QP08 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
H2al1kJ3QP08 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al1kJ3QP08 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al1kJ3QP08 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al1kJ3QP08 Gm38342-201ENSMUST00000195710 2980 ntBASIC12.73□□□□□ -0.37
H2al1kJ3QP08 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
H2al1kJ3QP08 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al1kJ3QP08 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2al1kJ3QP08 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al1kJ3QP08 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al1kJ3QP08 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al1kJ3QP08 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2al1kJ3QP08 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2al1kJ3QP08 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2al1kJ3QP08 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2al1kJ3QP08 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2al1kJ3QP08 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2al1kJ3QP08 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2al1kJ3QP08 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2al1kJ3QP08 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
H2al1kJ3QP08 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2al1kJ3QP08 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC12.72□□□□□ -0.37
H2al1kJ3QP08 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2al1kJ3QP08 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
H2al1kJ3QP08 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H2al1kJ3QP08 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2al1kJ3QP08 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2al1kJ3QP08 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2al1kJ3QP08 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2al1kJ3QP08 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H2al1kJ3QP08 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
H2al1kJ3QP08 Golph3-202ENSMUST00000226517 2359 ntBASIC12.71□□□□□ -0.38
H2al1kJ3QP08 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
H2al1kJ3QP08 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2al1kJ3QP08 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2al1kJ3QP08 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.7□□□□□ -0.38
H2al1kJ3QP08 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
H2al1kJ3QP08 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2al1kJ3QP08 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
H2al1kJ3QP08 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2al1kJ3QP08 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2al1kJ3QP08 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2al1kJ3QP08 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2al1kJ3QP08 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2al1kJ3QP08 Gm6934-201ENSMUST00000194780 1905 ntBASIC12.69□□□□□ -0.38
H2al1kJ3QP08 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
H2al1kJ3QP08 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2al1kJ3QP08 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
H2al1kJ3QP08 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
H2al1kJ3QP08 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2al1kJ3QP08 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2al1kJ3QP08 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2al1kJ3QP08 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2al1kJ3QP08 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC12.68□□□□□ -0.38
H2al1kJ3QP08 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2al1kJ3QP08 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2al1kJ3QP08 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
H2al1kJ3QP08 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2al1kJ3QP08 Rarb-207ENSMUST00000225921 2756 ntBASIC12.68□□□□□ -0.38
H2al1kJ3QP08 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2al1kJ3QP08 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2al1kJ3QP08 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2al1kJ3QP08 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2al1kJ3QP08 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2al1kJ3QP08 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
H2al1kJ3QP08 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2al1kJ3QP08 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2al1kJ3QP08 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H2al1kJ3QP08 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC12.67□□□□□ -0.38
H2al1kJ3QP08 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2al1kJ3QP08 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H2al1kJ3QP08 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H2al1kJ3QP08 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H2al1kJ3QP08 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2al1kJ3QP08 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2al1kJ3QP08 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2al1kJ3QP08 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2al1kJ3QP08 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2al1kJ3QP08 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H2al1kJ3QP08 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms