Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.69■■□□□ 1.06
Sgo2bJ3QMK1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Sgo2bJ3QMK1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sgo2bJ3QMK1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Sgo2bJ3QMK1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.68■■□□□ 1.06
Sgo2bJ3QMK1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sgo2bJ3QMK1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Sgo2bJ3QMK1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sgo2bJ3QMK1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sgo2bJ3QMK1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sgo2bJ3QMK1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Sgo2bJ3QMK1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sgo2bJ3QMK1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sgo2bJ3QMK1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Sgo2bJ3QMK1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sgo2bJ3QMK1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sgo2bJ3QMK1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Sgo2bJ3QMK1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sgo2bJ3QMK1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sgo2bJ3QMK1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sgo2bJ3QMK1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sgo2bJ3QMK1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sgo2bJ3QMK1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sgo2bJ3QMK1 Mir6538-201ENSMUST00000183713 110 ntBASIC21.66■■□□□ 1.06
Sgo2bJ3QMK1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Sgo2bJ3QMK1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sgo2bJ3QMK1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sgo2bJ3QMK1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sgo2bJ3QMK1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sgo2bJ3QMK1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sgo2bJ3QMK1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sgo2bJ3QMK1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sgo2bJ3QMK1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.64■■□□□ 1.05
Sgo2bJ3QMK1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.64■■□□□ 1.05
Sgo2bJ3QMK1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Sgo2bJ3QMK1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Sgo2bJ3QMK1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sgo2bJ3QMK1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sgo2bJ3QMK1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sgo2bJ3QMK1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sgo2bJ3QMK1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sgo2bJ3QMK1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sgo2bJ3QMK1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.61■■□□□ 1.05
Sgo2bJ3QMK1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sgo2bJ3QMK1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sgo2bJ3QMK1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sgo2bJ3QMK1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.61■■□□□ 1.05
Sgo2bJ3QMK1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.61■■□□□ 1.05
Sgo2bJ3QMK1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sgo2bJ3QMK1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.61■■□□□ 1.05
Sgo2bJ3QMK1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Sgo2bJ3QMK1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sgo2bJ3QMK1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sgo2bJ3QMK1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Sgo2bJ3QMK1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sgo2bJ3QMK1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sgo2bJ3QMK1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sgo2bJ3QMK1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sgo2bJ3QMK1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sgo2bJ3QMK1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sgo2bJ3QMK1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sgo2bJ3QMK1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sgo2bJ3QMK1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Sgo2bJ3QMK1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sgo2bJ3QMK1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sgo2bJ3QMK1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sgo2bJ3QMK1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sgo2bJ3QMK1 Gm27502-201ENSMUST00000183495 199 ntBASIC21.58■■□□□ 1.05
Sgo2bJ3QMK1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sgo2bJ3QMK1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sgo2bJ3QMK1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sgo2bJ3QMK1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sgo2bJ3QMK1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sgo2bJ3QMK1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Sgo2bJ3QMK1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Sgo2bJ3QMK1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sgo2bJ3QMK1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sgo2bJ3QMK1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sgo2bJ3QMK1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sgo2bJ3QMK1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.56■■□□□ 1.04
Sgo2bJ3QMK1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sgo2bJ3QMK1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.56■■□□□ 1.04
Sgo2bJ3QMK1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Sgo2bJ3QMK1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sgo2bJ3QMK1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.56■■□□□ 1.04
Sgo2bJ3QMK1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sgo2bJ3QMK1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.55■■□□□ 1.04
Sgo2bJ3QMK1 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.55■■□□□ 1.04
Sgo2bJ3QMK1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sgo2bJ3QMK1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sgo2bJ3QMK1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Sgo2bJ3QMK1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.54■■□□□ 1.04
Sgo2bJ3QMK1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sgo2bJ3QMK1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.54■■□□□ 1.04
Sgo2bJ3QMK1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sgo2bJ3QMK1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Sgo2bJ3QMK1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sgo2bJ3QMK1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sgo2bJ3QMK1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sgo2bJ3QMK1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms