Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf213E9Q555 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf213E9Q555 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf213E9Q555 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf213E9Q555 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf213E9Q555 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC10.98□□□□□ -0.65
Rnf213E9Q555 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf213E9Q555 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf213E9Q555 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf213E9Q555 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf213E9Q555 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf213E9Q555 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rnf213E9Q555 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rnf213E9Q555 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf213E9Q555 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf213E9Q555 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf213E9Q555 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC10.97□□□□□ -0.65
Rnf213E9Q555 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC10.97□□□□□ -0.65
Rnf213E9Q555 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf213E9Q555 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf213E9Q555 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf213E9Q555 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Rnf213E9Q555 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf213E9Q555 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf213E9Q555 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf213E9Q555 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf213E9Q555 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf213E9Q555 Gm6139-201ENSMUST00000079261 882 ntBASIC10.96□□□□□ -0.65
Rnf213E9Q555 Gm5874-201ENSMUST00000096101 508 ntBASIC10.96□□□□□ -0.66
Rnf213E9Q555 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf213E9Q555 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.66
Rnf213E9Q555 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf213E9Q555 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf213E9Q555 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf213E9Q555 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf213E9Q555 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC10.94□□□□□ -0.66
Rnf213E9Q555 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf213E9Q555 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Rnf213E9Q555 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf213E9Q555 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf213E9Q555 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Rnf213E9Q555 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC10.94□□□□□ -0.66
Rnf213E9Q555 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC10.94□□□□□ -0.66
Rnf213E9Q555 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC10.94□□□□□ -0.66
Rnf213E9Q555 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Rnf213E9Q555 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf213E9Q555 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf213E9Q555 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC10.94□□□□□ -0.66
Rnf213E9Q555 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf213E9Q555 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf213E9Q555 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf213E9Q555 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf213E9Q555 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rnf213E9Q555 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf213E9Q555 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf213E9Q555 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf213E9Q555 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC10.93□□□□□ -0.66
Rnf213E9Q555 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf213E9Q555 AC164433.2-201ENSMUST00000226346 1701 ntBASIC10.93□□□□□ -0.66
Rnf213E9Q555 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf213E9Q555 Gm7291-201ENSMUST00000199147 382 ntBASIC10.92□□□□□ -0.66
Rnf213E9Q555 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rnf213E9Q555 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC10.92□□□□□ -0.66
Rnf213E9Q555 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rnf213E9Q555 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Rnf213E9Q555 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf213E9Q555 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf213E9Q555 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf213E9Q555 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
Rnf213E9Q555 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf213E9Q555 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf213E9Q555 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC10.92□□□□□ -0.66
Rnf213E9Q555 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC10.92□□□□□ -0.66
Rnf213E9Q555 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf213E9Q555 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf213E9Q555 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rnf213E9Q555 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf213E9Q555 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf213E9Q555 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf213E9Q555 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Rnf213E9Q555 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf213E9Q555 Gm9207-201ENSMUST00000198773 1115 ntBASIC10.91□□□□□ -0.66
Rnf213E9Q555 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC10.91□□□□□ -0.66
Rnf213E9Q555 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf213E9Q555 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms