Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BC035044E0CXF8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BC035044E0CXF8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.57■□□□□ 0.56
BC035044E0CXF8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BC035044E0CXF8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
BC035044E0CXF8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BC035044E0CXF8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
BC035044E0CXF8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BC035044E0CXF8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.56■□□□□ 0.56
BC035044E0CXF8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BC035044E0CXF8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BC035044E0CXF8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
BC035044E0CXF8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BC035044E0CXF8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
BC035044E0CXF8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BC035044E0CXF8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BC035044E0CXF8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BC035044E0CXF8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.55■□□□□ 0.56
BC035044E0CXF8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
BC035044E0CXF8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.55■□□□□ 0.56
BC035044E0CXF8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BC035044E0CXF8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BC035044E0CXF8 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.54■□□□□ 0.56
BC035044E0CXF8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BC035044E0CXF8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BC035044E0CXF8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
BC035044E0CXF8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.53■□□□□ 0.56
BC035044E0CXF8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BC035044E0CXF8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
BC035044E0CXF8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.53■□□□□ 0.56
BC035044E0CXF8 Gm7432-201ENSMUST00000210343 879 ntBASIC18.52■□□□□ 0.56
BC035044E0CXF8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
BC035044E0CXF8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
BC035044E0CXF8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.52■□□□□ 0.55
BC035044E0CXF8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BC035044E0CXF8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.52■□□□□ 0.55
BC035044E0CXF8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BC035044E0CXF8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BC035044E0CXF8 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.51■□□□□ 0.55
BC035044E0CXF8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BC035044E0CXF8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BC035044E0CXF8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BC035044E0CXF8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BC035044E0CXF8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BC035044E0CXF8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BC035044E0CXF8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BC035044E0CXF8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.5■□□□□ 0.55
BC035044E0CXF8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BC035044E0CXF8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BC035044E0CXF8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
BC035044E0CXF8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BC035044E0CXF8 Gm11599-201ENSMUST00000118720 878 ntBASIC18.49■□□□□ 0.55
BC035044E0CXF8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BC035044E0CXF8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BC035044E0CXF8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BC035044E0CXF8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BC035044E0CXF8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BC035044E0CXF8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BC035044E0CXF8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BC035044E0CXF8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BC035044E0CXF8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BC035044E0CXF8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BC035044E0CXF8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.48■□□□□ 0.55
BC035044E0CXF8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BC035044E0CXF8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
BC035044E0CXF8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BC035044E0CXF8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BC035044E0CXF8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC035044E0CXF8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC035044E0CXF8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
BC035044E0CXF8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.46■□□□□ 0.55
BC035044E0CXF8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC035044E0CXF8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC035044E0CXF8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC035044E0CXF8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.46■□□□□ 0.55
BC035044E0CXF8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
BC035044E0CXF8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
BC035044E0CXF8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.45■□□□□ 0.54
BC035044E0CXF8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BC035044E0CXF8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BC035044E0CXF8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BC035044E0CXF8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.45■□□□□ 0.54
BC035044E0CXF8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.45■□□□□ 0.54
BC035044E0CXF8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BC035044E0CXF8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.45■□□□□ 0.54
BC035044E0CXF8 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.45■□□□□ 0.54
BC035044E0CXF8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BC035044E0CXF8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BC035044E0CXF8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BC035044E0CXF8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
BC035044E0CXF8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
BC035044E0CXF8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BC035044E0CXF8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BC035044E0CXF8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BC035044E0CXF8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
BC035044E0CXF8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BC035044E0CXF8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BC035044E0CXF8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC035044E0CXF8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BC035044E0CXF8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms