Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smim17A0A504 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Smim17A0A504 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Smim17A0A504 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.74■□□□□ 0.75
Smim17A0A504 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim17A0A504 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim17A0A504 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim17A0A504 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim17A0A504 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.74■□□□□ 0.75
Smim17A0A504 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.74■□□□□ 0.75
Smim17A0A504 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim17A0A504 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim17A0A504 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim17A0A504 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim17A0A504 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim17A0A504 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim17A0A504 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim17A0A504 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smim17A0A504 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smim17A0A504 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim17A0A504 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim17A0A504 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim17A0A504 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smim17A0A504 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim17A0A504 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim17A0A504 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim17A0A504 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smim17A0A504 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smim17A0A504 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smim17A0A504 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smim17A0A504 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smim17A0A504 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim17A0A504 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim17A0A504 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim17A0A504 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim17A0A504 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Smim17A0A504 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Smim17A0A504 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smim17A0A504 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim17A0A504 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smim17A0A504 Iqck-206ENSMUST00000208658 2891 ntBASIC19.69■□□□□ 0.74
Smim17A0A504 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim17A0A504 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim17A0A504 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Smim17A0A504 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim17A0A504 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim17A0A504 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim17A0A504 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smim17A0A504 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim17A0A504 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim17A0A504 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim17A0A504 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim17A0A504 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim17A0A504 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.67■□□□□ 0.74
Smim17A0A504 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim17A0A504 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim17A0A504 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Smim17A0A504 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim17A0A504 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smim17A0A504 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim17A0A504 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim17A0A504 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smim17A0A504 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Smim17A0A504 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smim17A0A504 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Smim17A0A504 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smim17A0A504 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smim17A0A504 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smim17A0A504 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smim17A0A504 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Smim17A0A504 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smim17A0A504 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smim17A0A504 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smim17A0A504 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smim17A0A504 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Smim17A0A504 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smim17A0A504 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.63■□□□□ 0.73
Smim17A0A504 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smim17A0A504 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smim17A0A504 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Smim17A0A504 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smim17A0A504 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.61■□□□□ 0.73
Smim17A0A504 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Smim17A0A504 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.61■□□□□ 0.73
Smim17A0A504 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.61■□□□□ 0.73
Smim17A0A504 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smim17A0A504 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smim17A0A504 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.61■□□□□ 0.73
Smim17A0A504 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smim17A0A504 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smim17A0A504 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smim17A0A504 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smim17A0A504 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smim17A0A504 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim17A0A504 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.6■□□□□ 0.73
Smim17A0A504 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.6■□□□□ 0.73
Smim17A0A504 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim17A0A504 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim17A0A504 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim17A0A504 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms