Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-4A0A0G2JG37 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trav9d-4A0A0G2JG37 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-4A0A0G2JG37 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trav9d-4A0A0G2JG37 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav9d-4A0A0G2JG37 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-4A0A0G2JG37 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-4A0A0G2JG37 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav9d-4A0A0G2JG37 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav9d-4A0A0G2JG37 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-4A0A0G2JG37 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9d-4A0A0G2JG37 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav9d-4A0A0G2JG37 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9d-4A0A0G2JG37 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9d-4A0A0G2JG37 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9d-4A0A0G2JG37 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9d-4A0A0G2JG37 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9d-4A0A0G2JG37 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9d-4A0A0G2JG37 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9d-4A0A0G2JG37 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9d-4A0A0G2JG37 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9d-4A0A0G2JG37 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav9d-4A0A0G2JG37 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9d-4A0A0G2JG37 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav9d-4A0A0G2JG37 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav9d-4A0A0G2JG37 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9d-4A0A0G2JG37 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9d-4A0A0G2JG37 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9d-4A0A0G2JG37 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9d-4A0A0G2JG37 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav9d-4A0A0G2JG37 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.82□□□□□ -0.04
Trav9d-4A0A0G2JG37 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9d-4A0A0G2JG37 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9d-4A0A0G2JG37 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav9d-4A0A0G2JG37 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9d-4A0A0G2JG37 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9d-4A0A0G2JG37 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9d-4A0A0G2JG37 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9d-4A0A0G2JG37 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav9d-4A0A0G2JG37 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9d-4A0A0G2JG37 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9d-4A0A0G2JG37 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9d-4A0A0G2JG37 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9d-4A0A0G2JG37 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9d-4A0A0G2JG37 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav9d-4A0A0G2JG37 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9d-4A0A0G2JG37 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav9d-4A0A0G2JG37 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9d-4A0A0G2JG37 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.78□□□□□ -0.04
Trav9d-4A0A0G2JG37 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav9d-4A0A0G2JG37 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9d-4A0A0G2JG37 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav9d-4A0A0G2JG37 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trav9d-4A0A0G2JG37 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9d-4A0A0G2JG37 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9d-4A0A0G2JG37 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav9d-4A0A0G2JG37 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-4A0A0G2JG37 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9d-4A0A0G2JG37 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-4A0A0G2JG37 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-4A0A0G2JG37 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-4A0A0G2JG37 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-4A0A0G2JG37 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav9d-4A0A0G2JG37 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
Trav9d-4A0A0G2JG37 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-4A0A0G2JG37 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9d-4A0A0G2JG37 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Trav9d-4A0A0G2JG37 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-4A0A0G2JG37 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav9d-4A0A0G2JG37 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-4A0A0G2JG37 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trav9d-4A0A0G2JG37 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-4A0A0G2JG37 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav9d-4A0A0G2JG37 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9d-4A0A0G2JG37 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav9d-4A0A0G2JG37 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-4A0A0G2JG37 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-4A0A0G2JG37 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-4A0A0G2JG37 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav9d-4A0A0G2JG37 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-4A0A0G2JG37 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-4A0A0G2JG37 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-4A0A0G2JG37 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-4A0A0G2JG37 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-4A0A0G2JG37 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9d-4A0A0G2JG37 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms