Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.99■□□□□ 0.31
Trbv1A0A0B4J1G7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Trbv1A0A0B4J1G7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv1A0A0B4J1G7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv1A0A0B4J1G7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv1A0A0B4J1G7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv1A0A0B4J1G7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv1A0A0B4J1G7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv1A0A0B4J1G7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv1A0A0B4J1G7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trbv1A0A0B4J1G7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv1A0A0B4J1G7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv1A0A0B4J1G7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv1A0A0B4J1G7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.97■□□□□ 0.31
Trbv1A0A0B4J1G7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv1A0A0B4J1G7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv1A0A0B4J1G7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv1A0A0B4J1G7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv1A0A0B4J1G7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trbv1A0A0B4J1G7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv1A0A0B4J1G7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv1A0A0B4J1G7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv1A0A0B4J1G7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv1A0A0B4J1G7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.95■□□□□ 0.3
Trbv1A0A0B4J1G7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv1A0A0B4J1G7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv1A0A0B4J1G7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv1A0A0B4J1G7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trbv1A0A0B4J1G7 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.94■□□□□ 0.3
Trbv1A0A0B4J1G7 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.94■□□□□ 0.3
Trbv1A0A0B4J1G7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv1A0A0B4J1G7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv1A0A0B4J1G7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv1A0A0B4J1G7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv1A0A0B4J1G7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Trbv1A0A0B4J1G7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv1A0A0B4J1G7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trbv1A0A0B4J1G7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv1A0A0B4J1G7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv1A0A0B4J1G7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trbv1A0A0B4J1G7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trbv1A0A0B4J1G7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv1A0A0B4J1G7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv1A0A0B4J1G7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv1A0A0B4J1G7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv1A0A0B4J1G7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trbv1A0A0B4J1G7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv1A0A0B4J1G7 Gm11599-201ENSMUST00000118720 878 ntBASIC16.92■□□□□ 0.3
Trbv1A0A0B4J1G7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trbv1A0A0B4J1G7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.92■□□□□ 0.3
Trbv1A0A0B4J1G7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trbv1A0A0B4J1G7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.91■□□□□ 0.3
Trbv1A0A0B4J1G7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv1A0A0B4J1G7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv1A0A0B4J1G7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv1A0A0B4J1G7 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv1A0A0B4J1G7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trbv1A0A0B4J1G7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv1A0A0B4J1G7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trbv1A0A0B4J1G7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.89■□□□□ 0.29
Trbv1A0A0B4J1G7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv1A0A0B4J1G7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv1A0A0B4J1G7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Trbv1A0A0B4J1G7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv1A0A0B4J1G7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv1A0A0B4J1G7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv1A0A0B4J1G7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv1A0A0B4J1G7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trbv1A0A0B4J1G7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv1A0A0B4J1G7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv1A0A0B4J1G7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv1A0A0B4J1G7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv1A0A0B4J1G7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv1A0A0B4J1G7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trbv1A0A0B4J1G7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv1A0A0B4J1G7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trbv1A0A0B4J1G7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv1A0A0B4J1G7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv1A0A0B4J1G7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv1A0A0B4J1G7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv1A0A0B4J1G7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv1A0A0B4J1G7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv1A0A0B4J1G7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv1A0A0B4J1G7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.86■□□□□ 0.29
Trbv1A0A0B4J1G7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv1A0A0B4J1G7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms