Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13-2A0A075B649 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav13-2A0A075B649 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13-2A0A075B649 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13-2A0A075B649 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-2A0A075B649 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13-2A0A075B649 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13-2A0A075B649 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13-2A0A075B649 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13-2A0A075B649 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13-2A0A075B649 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav13-2A0A075B649 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13-2A0A075B649 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13-2A0A075B649 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav13-2A0A075B649 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.52□□□□□ -0.09
Trav13-2A0A075B649 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trav13-2A0A075B649 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-2A0A075B649 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-2A0A075B649 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav13-2A0A075B649 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-2A0A075B649 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-2A0A075B649 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13-2A0A075B649 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13-2A0A075B649 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13-2A0A075B649 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13-2A0A075B649 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav13-2A0A075B649 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13-2A0A075B649 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav13-2A0A075B649 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13-2A0A075B649 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13-2A0A075B649 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13-2A0A075B649 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav13-2A0A075B649 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13-2A0A075B649 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13-2A0A075B649 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav13-2A0A075B649 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav13-2A0A075B649 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav13-2A0A075B649 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13-2A0A075B649 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13-2A0A075B649 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13-2A0A075B649 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13-2A0A075B649 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav13-2A0A075B649 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.47□□□□□ -0.09
Trav13-2A0A075B649 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-2A0A075B649 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trav13-2A0A075B649 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav13-2A0A075B649 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-2A0A075B649 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-2A0A075B649 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav13-2A0A075B649 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav13-2A0A075B649 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-2A0A075B649 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.46□□□□□ -0.09
Trav13-2A0A075B649 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-2A0A075B649 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-2A0A075B649 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-2A0A075B649 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13-2A0A075B649 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-2A0A075B649 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-2A0A075B649 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav13-2A0A075B649 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-2A0A075B649 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-2A0A075B649 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-2A0A075B649 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-2A0A075B649 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-2A0A075B649 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-2A0A075B649 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-2A0A075B649 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-2A0A075B649 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-2A0A075B649 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-2A0A075B649 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-2A0A075B649 Gm9939-201ENSMUST00000067161 1154 ntBASIC14.44□□□□□ -0.1
Trav13-2A0A075B649 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-2A0A075B649 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-2A0A075B649 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav13-2A0A075B649 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav13-2A0A075B649 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav13-2A0A075B649 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-2A0A075B649 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-2A0A075B649 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-2A0A075B649 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-2A0A075B649 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trav13-2A0A075B649 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-2A0A075B649 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-2A0A075B649 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav13-2A0A075B649 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13-2A0A075B649 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms