Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Gm6912-201ENSMUST00000117218 544 ntBASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Gm11918-201ENSMUST00000121660 179 ntBASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
4933424G06RikA0A140LIP3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Gm5279-201ENSMUST00000199575 745 ntBASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
4933424G06RikA0A140LIP3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
4933424G06RikA0A140LIP3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
4933424G06RikA0A140LIP3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
4933424G06RikA0A140LIP3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
4933424G06RikA0A140LIP3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
4933424G06RikA0A140LIP3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
4933424G06RikA0A140LIP3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
4933424G06RikA0A140LIP3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
4933424G06RikA0A140LIP3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.27□□□□□ -0.12
4933424G06RikA0A140LIP3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
4933424G06RikA0A140LIP3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
4933424G06RikA0A140LIP3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
4933424G06RikA0A140LIP3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
4933424G06RikA0A140LIP3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
4933424G06RikA0A140LIP3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms