Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm37714-201ENSMUST00000194742 342 ntBASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
4933424G06RikA0A140LIP3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Mir6392-201ENSMUST00000184924 108 ntBASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm18027-201ENSMUST00000218947 619 ntBASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
4933424G06RikA0A140LIP3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.33□□□□□ -0.11
4933424G06RikA0A140LIP3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
4933424G06RikA0A140LIP3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
4933424G06RikA0A140LIP3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Gm9908-201ENSMUST00000211534 448 ntBASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Gm17795-201ENSMUST00000214505 757 ntBASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
4933424G06RikA0A140LIP3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
4933424G06RikA0A140LIP3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.32□□□□□ -0.12
4933424G06RikA0A140LIP3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
4933424G06RikA0A140LIP3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
4933424G06RikA0A140LIP3 Gm11478-201ENSMUST00000117851 599 ntBASIC14.32□□□□□ -0.12
4933424G06RikA0A140LIP3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
4933424G06RikA0A140LIP3 Gm5354-201ENSMUST00000182417 973 ntBASIC14.32□□□□□ -0.12
4933424G06RikA0A140LIP3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
4933424G06RikA0A140LIP3 Gm45384-201ENSMUST00000210451 277 ntBASIC14.32□□□□□ -0.12
4933424G06RikA0A140LIP3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms