Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
4933424G06RikA0A140LIP3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Gm18018-201ENSMUST00000198273 408 ntBASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
4933424G06RikA0A140LIP3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm12134-201ENSMUST00000122109 520 ntBASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm4804-201ENSMUST00000182234 999 ntBASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm5425-201ENSMUST00000214125 459 ntBASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm19220-201ENSMUST00000222682 803 ntBASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
4933424G06RikA0A140LIP3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933424G06RikA0A140LIP3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
4933424G06RikA0A140LIP3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933424G06RikA0A140LIP3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933424G06RikA0A140LIP3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
4933424G06RikA0A140LIP3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
4933424G06RikA0A140LIP3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
4933424G06RikA0A140LIP3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms