Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn13Q9Z0S4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn13Q9Z0S4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn13Q9Z0S4 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.54■□□□□ 0.72
Cldn13Q9Z0S4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cldn13Q9Z0S4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn13Q9Z0S4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Cldn13Q9Z0S4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn13Q9Z0S4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn13Q9Z0S4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn13Q9Z0S4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn13Q9Z0S4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn13Q9Z0S4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn13Q9Z0S4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn13Q9Z0S4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn13Q9Z0S4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.52■□□□□ 0.72
Cldn13Q9Z0S4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn13Q9Z0S4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn13Q9Z0S4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn13Q9Z0S4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn13Q9Z0S4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn13Q9Z0S4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cldn13Q9Z0S4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.51■□□□□ 0.71
Cldn13Q9Z0S4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn13Q9Z0S4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn13Q9Z0S4 Gm14523-201ENSMUST00000117260 558 ntBASIC19.51■□□□□ 0.71
Cldn13Q9Z0S4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn13Q9Z0S4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.51■□□□□ 0.71
Cldn13Q9Z0S4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn13Q9Z0S4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn13Q9Z0S4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn13Q9Z0S4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn13Q9Z0S4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn13Q9Z0S4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn13Q9Z0S4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Cldn13Q9Z0S4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.49■□□□□ 0.71
Cldn13Q9Z0S4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.49■□□□□ 0.71
Cldn13Q9Z0S4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn13Q9Z0S4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn13Q9Z0S4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.49■□□□□ 0.71
Cldn13Q9Z0S4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn13Q9Z0S4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.49■□□□□ 0.71
Cldn13Q9Z0S4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Cldn13Q9Z0S4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn13Q9Z0S4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn13Q9Z0S4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.48■□□□□ 0.71
Cldn13Q9Z0S4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cldn13Q9Z0S4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn13Q9Z0S4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn13Q9Z0S4 Gm7332-201ENSMUST00000118351 454 ntBASIC19.47■□□□□ 0.71
Cldn13Q9Z0S4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Cldn13Q9Z0S4 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.47■□□□□ 0.71
Cldn13Q9Z0S4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn13Q9Z0S4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.46■□□□□ 0.71
Cldn13Q9Z0S4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.46■□□□□ 0.71
Cldn13Q9Z0S4 Gm44428-201ENSMUST00000204474 874 ntBASIC19.46■□□□□ 0.71
Cldn13Q9Z0S4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn13Q9Z0S4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.46■□□□□ 0.71
Cldn13Q9Z0S4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn13Q9Z0S4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cldn13Q9Z0S4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn13Q9Z0S4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn13Q9Z0S4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn13Q9Z0S4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn13Q9Z0S4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.45■□□□□ 0.7
Cldn13Q9Z0S4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cldn13Q9Z0S4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn13Q9Z0S4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn13Q9Z0S4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cldn13Q9Z0S4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.44■□□□□ 0.7
Cldn13Q9Z0S4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn13Q9Z0S4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn13Q9Z0S4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn13Q9Z0S4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn13Q9Z0S4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cldn13Q9Z0S4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn13Q9Z0S4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn13Q9Z0S4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn13Q9Z0S4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.42■□□□□ 0.7
Cldn13Q9Z0S4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn13Q9Z0S4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Cldn13Q9Z0S4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn13Q9Z0S4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn13Q9Z0S4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn13Q9Z0S4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cldn13Q9Z0S4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn13Q9Z0S4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.41■□□□□ 0.7
Cldn13Q9Z0S4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn13Q9Z0S4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn13Q9Z0S4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn13Q9Z0S4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn13Q9Z0S4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.4■□□□□ 0.7
Cldn13Q9Z0S4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.4■□□□□ 0.7
Cldn13Q9Z0S4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.4■□□□□ 0.7
Cldn13Q9Z0S4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cldn13Q9Z0S4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cldn13Q9Z0S4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cldn13Q9Z0S4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.39■□□□□ 0.69
Cldn13Q9Z0S4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn13Q9Z0S4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms