Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbfox1Q9JJ43 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbfox1Q9JJ43 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbfox1Q9JJ43 Gm45364-201ENSMUST00000210883 159 ntBASIC18.65■□□□□ 0.58
Rbfox1Q9JJ43 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbfox1Q9JJ43 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rbfox1Q9JJ43 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.64■□□□□ 0.58
Rbfox1Q9JJ43 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbfox1Q9JJ43 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rbfox1Q9JJ43 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbfox1Q9JJ43 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rbfox1Q9JJ43 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbfox1Q9JJ43 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rbfox1Q9JJ43 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rbfox1Q9JJ43 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rbfox1Q9JJ43 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rbfox1Q9JJ43 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbfox1Q9JJ43 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbfox1Q9JJ43 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbfox1Q9JJ43 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rbfox1Q9JJ43 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbfox1Q9JJ43 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbfox1Q9JJ43 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbfox1Q9JJ43 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rbfox1Q9JJ43 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbfox1Q9JJ43 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.61■□□□□ 0.57
Rbfox1Q9JJ43 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbfox1Q9JJ43 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbfox1Q9JJ43 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.61■□□□□ 0.57
Rbfox1Q9JJ43 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rbfox1Q9JJ43 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Rbfox1Q9JJ43 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbfox1Q9JJ43 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rbfox1Q9JJ43 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbfox1Q9JJ43 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rbfox1Q9JJ43 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbfox1Q9JJ43 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbfox1Q9JJ43 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbfox1Q9JJ43 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rbfox1Q9JJ43 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbfox1Q9JJ43 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbfox1Q9JJ43 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbfox1Q9JJ43 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbfox1Q9JJ43 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbfox1Q9JJ43 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbfox1Q9JJ43 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbfox1Q9JJ43 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Rbfox1Q9JJ43 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rbfox1Q9JJ43 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rbfox1Q9JJ43 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rbfox1Q9JJ43 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rbfox1Q9JJ43 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rbfox1Q9JJ43 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rbfox1Q9JJ43 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbfox1Q9JJ43 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rbfox1Q9JJ43 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.57■□□□□ 0.56
Rbfox1Q9JJ43 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rbfox1Q9JJ43 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbfox1Q9JJ43 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rbfox1Q9JJ43 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rbfox1Q9JJ43 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbfox1Q9JJ43 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rbfox1Q9JJ43 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbfox1Q9JJ43 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rbfox1Q9JJ43 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rbfox1Q9JJ43 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.56■□□□□ 0.56
Rbfox1Q9JJ43 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbfox1Q9JJ43 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbfox1Q9JJ43 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbfox1Q9JJ43 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbfox1Q9JJ43 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbfox1Q9JJ43 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rbfox1Q9JJ43 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbfox1Q9JJ43 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.55■□□□□ 0.56
Rbfox1Q9JJ43 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbfox1Q9JJ43 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbfox1Q9JJ43 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.55■□□□□ 0.56
Rbfox1Q9JJ43 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbfox1Q9JJ43 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbfox1Q9JJ43 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbfox1Q9JJ43 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbfox1Q9JJ43 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.54■□□□□ 0.56
Rbfox1Q9JJ43 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rbfox1Q9JJ43 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rbfox1Q9JJ43 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.53■□□□□ 0.56
Rbfox1Q9JJ43 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.53■□□□□ 0.56
Rbfox1Q9JJ43 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rbfox1Q9JJ43 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rbfox1Q9JJ43 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rbfox1Q9JJ43 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Rbfox1Q9JJ43 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rbfox1Q9JJ43 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rbfox1Q9JJ43 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rbfox1Q9JJ43 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rbfox1Q9JJ43 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.52■□□□□ 0.55
Rbfox1Q9JJ43 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rbfox1Q9JJ43 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rbfox1Q9JJ43 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rbfox1Q9JJ43 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rbfox1Q9JJ43 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms