Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.86■□□□□ 0.61
Cir1Q9DA19 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cir1Q9DA19 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cir1Q9DA19 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cir1Q9DA19 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cir1Q9DA19 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cir1Q9DA19 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cir1Q9DA19 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cir1Q9DA19 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.84■□□□□ 0.61
Cir1Q9DA19 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cir1Q9DA19 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cir1Q9DA19 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cir1Q9DA19 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cir1Q9DA19 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cir1Q9DA19 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cir1Q9DA19 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.83■□□□□ 0.6
Cir1Q9DA19 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cir1Q9DA19 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cir1Q9DA19 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cir1Q9DA19 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cir1Q9DA19 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cir1Q9DA19 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Cir1Q9DA19 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cir1Q9DA19 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cir1Q9DA19 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cir1Q9DA19 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.82■□□□□ 0.6
Cir1Q9DA19 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cir1Q9DA19 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.81■□□□□ 0.6
Cir1Q9DA19 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cir1Q9DA19 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cir1Q9DA19 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cir1Q9DA19 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cir1Q9DA19 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cir1Q9DA19 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cir1Q9DA19 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cir1Q9DA19 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cir1Q9DA19 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.8■□□□□ 0.6
Cir1Q9DA19 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cir1Q9DA19 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cir1Q9DA19 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cir1Q9DA19 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cir1Q9DA19 Notumos-201ENSMUST00000151998 2659 ntBASIC18.78■□□□□ 0.6
Cir1Q9DA19 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cir1Q9DA19 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cir1Q9DA19 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cir1Q9DA19 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cir1Q9DA19 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cir1Q9DA19 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.78■□□□□ 0.6
Cir1Q9DA19 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.78■□□□□ 0.6
Cir1Q9DA19 Gm6311-201ENSMUST00000073790 878 ntBASIC18.78■□□□□ 0.6
Cir1Q9DA19 Cap2-205ENSMUST00000225824 1634 ntBASIC18.78■□□□□ 0.6
Cir1Q9DA19 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cir1Q9DA19 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cir1Q9DA19 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cir1Q9DA19 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cir1Q9DA19 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cir1Q9DA19 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cir1Q9DA19 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cir1Q9DA19 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Cir1Q9DA19 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Cir1Q9DA19 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cir1Q9DA19 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cir1Q9DA19 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cir1Q9DA19 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cir1Q9DA19 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cir1Q9DA19 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.74■□□□□ 0.59
Cir1Q9DA19 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.74■□□□□ 0.59
Cir1Q9DA19 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cir1Q9DA19 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cir1Q9DA19 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cir1Q9DA19 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cir1Q9DA19 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cir1Q9DA19 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cir1Q9DA19 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cir1Q9DA19 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cir1Q9DA19 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cir1Q9DA19 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.73■□□□□ 0.59
Cir1Q9DA19 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cir1Q9DA19 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cir1Q9DA19 Particl-201ENSMUST00000205370 1560 ntBASIC18.72■□□□□ 0.59
Cir1Q9DA19 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cir1Q9DA19 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cir1Q9DA19 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.72■□□□□ 0.59
Cir1Q9DA19 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cir1Q9DA19 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cir1Q9DA19 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cir1Q9DA19 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms