Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Raf1Q99N57 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Raf1Q99N57 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Raf1Q99N57 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Raf1Q99N57 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Raf1Q99N57 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Raf1Q99N57 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Raf1Q99N57 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Raf1Q99N57 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Raf1Q99N57 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Raf1Q99N57 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Raf1Q99N57 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Raf1Q99N57 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Raf1Q99N57 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Raf1Q99N57 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Raf1Q99N57 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Raf1Q99N57 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raf1Q99N57 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Raf1Q99N57 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raf1Q99N57 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raf1Q99N57 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raf1Q99N57 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Raf1Q99N57 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raf1Q99N57 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raf1Q99N57 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Raf1Q99N57 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Raf1Q99N57 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Raf1Q99N57 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Raf1Q99N57 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Raf1Q99N57 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Raf1Q99N57 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Raf1Q99N57 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Raf1Q99N57 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raf1Q99N57 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raf1Q99N57 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raf1Q99N57 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raf1Q99N57 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.46■□□□□ 0.71
Raf1Q99N57 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Raf1Q99N57 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raf1Q99N57 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
Raf1Q99N57 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Raf1Q99N57 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.45■□□□□ 0.7
Raf1Q99N57 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Raf1Q99N57 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Raf1Q99N57 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Raf1Q99N57 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Raf1Q99N57 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.44■□□□□ 0.7
Raf1Q99N57 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raf1Q99N57 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Raf1Q99N57 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raf1Q99N57 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raf1Q99N57 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raf1Q99N57 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raf1Q99N57 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Raf1Q99N57 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Raf1Q99N57 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Raf1Q99N57 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Raf1Q99N57 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Raf1Q99N57 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Raf1Q99N57 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Raf1Q99N57 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Raf1Q99N57 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Raf1Q99N57 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Raf1Q99N57 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Raf1Q99N57 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raf1Q99N57 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raf1Q99N57 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raf1Q99N57 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raf1Q99N57 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raf1Q99N57 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Raf1Q99N57 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raf1Q99N57 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raf1Q99N57 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raf1Q99N57 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.41■□□□□ 0.7
Raf1Q99N57 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raf1Q99N57 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.41■□□□□ 0.7
Raf1Q99N57 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Raf1Q99N57 Gm11687-201ENSMUST00000118911 886 ntBASIC19.4■□□□□ 0.7
Raf1Q99N57 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raf1Q99N57 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raf1Q99N57 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raf1Q99N57 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Raf1Q99N57 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Raf1Q99N57 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Raf1Q99N57 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.39■□□□□ 0.69
Raf1Q99N57 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.39■□□□□ 0.69
Raf1Q99N57 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raf1Q99N57 Scarna2-201ENSMUST00000157560 414 ntBASIC19.38■□□□□ 0.69
Raf1Q99N57 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Raf1Q99N57 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Raf1Q99N57 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.37■□□□□ 0.69
Raf1Q99N57 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
Raf1Q99N57 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Raf1Q99N57 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Raf1Q99N57 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Raf1Q99N57 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Raf1Q99N57 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Raf1Q99N57 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Raf1Q99N57 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Raf1Q99N57 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms