Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.78■■□□□ 1.72
Pcdhb22Q91XZ8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhb22Q91XZ8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Pcdhb22Q91XZ8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Pcdhb22Q91XZ8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhb22Q91XZ8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.77■■□□□ 1.72
Pcdhb22Q91XZ8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.76■■□□□ 1.71
Pcdhb22Q91XZ8 Gm10420-201ENSMUST00000121713 882 ntBASIC25.76■■□□□ 1.71
Pcdhb22Q91XZ8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Pcdhb22Q91XZ8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhb22Q91XZ8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhb22Q91XZ8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb22Q91XZ8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb22Q91XZ8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb22Q91XZ8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC25.75■■□□□ 1.71
Pcdhb22Q91XZ8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.75■■□□□ 1.71
Pcdhb22Q91XZ8 Gm22567-201ENSMUST00000175542 342 ntBASIC25.75■■□□□ 1.71
Pcdhb22Q91XZ8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb22Q91XZ8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC25.74■■□□□ 1.71
Pcdhb22Q91XZ8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb22Q91XZ8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb22Q91XZ8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Pcdhb22Q91XZ8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb22Q91XZ8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb22Q91XZ8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb22Q91XZ8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb22Q91XZ8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Pcdhb22Q91XZ8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb22Q91XZ8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb22Q91XZ8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb22Q91XZ8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb22Q91XZ8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
Pcdhb22Q91XZ8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Pcdhb22Q91XZ8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb22Q91XZ8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb22Q91XZ8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb22Q91XZ8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb22Q91XZ8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb22Q91XZ8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Pcdhb22Q91XZ8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb22Q91XZ8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb22Q91XZ8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhb22Q91XZ8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhb22Q91XZ8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhb22Q91XZ8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Pcdhb22Q91XZ8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
Pcdhb22Q91XZ8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Pcdhb22Q91XZ8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb22Q91XZ8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb22Q91XZ8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb22Q91XZ8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb22Q91XZ8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC25.68■■□□□ 1.7
Pcdhb22Q91XZ8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb22Q91XZ8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.68■■□□□ 1.7
Pcdhb22Q91XZ8 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.68■■□□□ 1.7
Pcdhb22Q91XZ8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Pcdhb22Q91XZ8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb22Q91XZ8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
Pcdhb22Q91XZ8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhb22Q91XZ8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhb22Q91XZ8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhb22Q91XZ8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb22Q91XZ8 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.66■■□□□ 1.7
Pcdhb22Q91XZ8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb22Q91XZ8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25.66■■□□□ 1.7
Pcdhb22Q91XZ8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Pcdhb22Q91XZ8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhb22Q91XZ8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Pcdhb22Q91XZ8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Pcdhb22Q91XZ8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Pcdhb22Q91XZ8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb22Q91XZ8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb22Q91XZ8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb22Q91XZ8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb22Q91XZ8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb22Q91XZ8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb22Q91XZ8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb22Q91XZ8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb22Q91XZ8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.61■■□□□ 1.69
Pcdhb22Q91XZ8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb22Q91XZ8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb22Q91XZ8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb22Q91XZ8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.61■■□□□ 1.69
Pcdhb22Q91XZ8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC25.6■■□□□ 1.69
Pcdhb22Q91XZ8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhb22Q91XZ8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhb22Q91XZ8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Pcdhb22Q91XZ8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb22Q91XZ8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.58■■□□□ 1.69
Pcdhb22Q91XZ8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb22Q91XZ8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb22Q91XZ8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb22Q91XZ8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Pcdhb22Q91XZ8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb22Q91XZ8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb22Q91XZ8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb22Q91XZ8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.57■■□□□ 1.68
Pcdhb22Q91XZ8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhb22Q91XZ8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.56■■□□□ 1.68
Pcdhb22Q91XZ8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.56■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms