Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.14■□□□□ 0.97
Cdt1Q8R4E9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdt1Q8R4E9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cdt1Q8R4E9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Cdt1Q8R4E9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cdt1Q8R4E9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdt1Q8R4E9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdt1Q8R4E9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cdt1Q8R4E9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdt1Q8R4E9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdt1Q8R4E9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cdt1Q8R4E9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdt1Q8R4E9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdt1Q8R4E9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdt1Q8R4E9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdt1Q8R4E9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdt1Q8R4E9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cdt1Q8R4E9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdt1Q8R4E9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cdt1Q8R4E9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdt1Q8R4E9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.1■□□□□ 0.97
Cdt1Q8R4E9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.1■□□□□ 0.97
Cdt1Q8R4E9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cdt1Q8R4E9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdt1Q8R4E9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cdt1Q8R4E9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cdt1Q8R4E9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cdt1Q8R4E9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cdt1Q8R4E9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Cdt1Q8R4E9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdt1Q8R4E9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cdt1Q8R4E9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cdt1Q8R4E9 Rps24-207ENSMUST00000224568 714 ntBASIC21.08■□□□□ 0.97
Cdt1Q8R4E9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdt1Q8R4E9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdt1Q8R4E9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Cdt1Q8R4E9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdt1Q8R4E9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdt1Q8R4E9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.07■□□□□ 0.96
Cdt1Q8R4E9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.07■□□□□ 0.96
Cdt1Q8R4E9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdt1Q8R4E9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Cdt1Q8R4E9 Gm15820-201ENSMUST00000201566 728 ntBASIC21.07■□□□□ 0.96
Cdt1Q8R4E9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdt1Q8R4E9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdt1Q8R4E9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdt1Q8R4E9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdt1Q8R4E9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdt1Q8R4E9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdt1Q8R4E9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.06■□□□□ 0.96
Cdt1Q8R4E9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdt1Q8R4E9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdt1Q8R4E9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Cdt1Q8R4E9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cdt1Q8R4E9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cdt1Q8R4E9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdt1Q8R4E9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.05■□□□□ 0.96
Cdt1Q8R4E9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.05■□□□□ 0.96
Cdt1Q8R4E9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cdt1Q8R4E9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.05■□□□□ 0.96
Cdt1Q8R4E9 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.05■□□□□ 0.96
Cdt1Q8R4E9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.05■□□□□ 0.96
Cdt1Q8R4E9 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.04■□□□□ 0.96
Cdt1Q8R4E9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdt1Q8R4E9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Cdt1Q8R4E9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdt1Q8R4E9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cdt1Q8R4E9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdt1Q8R4E9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdt1Q8R4E9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdt1Q8R4E9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdt1Q8R4E9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdt1Q8R4E9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdt1Q8R4E9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.02■□□□□ 0.96
Cdt1Q8R4E9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
Cdt1Q8R4E9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cdt1Q8R4E9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cdt1Q8R4E9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdt1Q8R4E9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdt1Q8R4E9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.01■□□□□ 0.95
Cdt1Q8R4E9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdt1Q8R4E9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdt1Q8R4E9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cdt1Q8R4E9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdt1Q8R4E9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdt1Q8R4E9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdt1Q8R4E9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Cdt1Q8R4E9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cdt1Q8R4E9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdt1Q8R4E9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdt1Q8R4E9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.99■□□□□ 0.95
Cdt1Q8R4E9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Cdt1Q8R4E9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cdt1Q8R4E9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdt1Q8R4E9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdt1Q8R4E9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdt1Q8R4E9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.98■□□□□ 0.95
Cdt1Q8R4E9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cdt1Q8R4E9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdt1Q8R4E9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms