Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Trim31Q8R0K2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim31Q8R0K2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim31Q8R0K2 Gm14523-201ENSMUST00000117260 558 ntBASIC21.29■■□□□ 1
Trim31Q8R0K2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.28■■□□□ 1
Trim31Q8R0K2 Gm44428-201ENSMUST00000204474 874 ntBASIC21.28■■□□□ 1
Trim31Q8R0K2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trim31Q8R0K2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.28■■□□□ 1
Trim31Q8R0K2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim31Q8R0K2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Trim31Q8R0K2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim31Q8R0K2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Trim31Q8R0K2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Trim31Q8R0K2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Trim31Q8R0K2 Gm7332-201ENSMUST00000118351 454 ntBASIC21.27■■□□□ 1
Trim31Q8R0K2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim31Q8R0K2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.27■■□□□ 1
Trim31Q8R0K2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Trim31Q8R0K2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim31Q8R0K2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trim31Q8R0K2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.27■□□□□ 0.99
Trim31Q8R0K2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim31Q8R0K2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim31Q8R0K2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.26■□□□□ 0.99
Trim31Q8R0K2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim31Q8R0K2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim31Q8R0K2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim31Q8R0K2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim31Q8R0K2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim31Q8R0K2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim31Q8R0K2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim31Q8R0K2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
Trim31Q8R0K2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.25■□□□□ 0.99
Trim31Q8R0K2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim31Q8R0K2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim31Q8R0K2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim31Q8R0K2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.24■□□□□ 0.99
Trim31Q8R0K2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim31Q8R0K2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim31Q8R0K2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim31Q8R0K2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim31Q8R0K2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim31Q8R0K2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim31Q8R0K2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim31Q8R0K2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim31Q8R0K2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.23■□□□□ 0.99
Trim31Q8R0K2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim31Q8R0K2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim31Q8R0K2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim31Q8R0K2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim31Q8R0K2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim31Q8R0K2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim31Q8R0K2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim31Q8R0K2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim31Q8R0K2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim31Q8R0K2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Trim31Q8R0K2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Trim31Q8R0K2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim31Q8R0K2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim31Q8R0K2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.21■□□□□ 0.99
Trim31Q8R0K2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim31Q8R0K2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Trim31Q8R0K2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim31Q8R0K2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trim31Q8R0K2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim31Q8R0K2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim31Q8R0K2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trim31Q8R0K2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim31Q8R0K2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim31Q8R0K2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim31Q8R0K2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim31Q8R0K2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim31Q8R0K2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim31Q8R0K2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim31Q8R0K2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim31Q8R0K2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.18■□□□□ 0.98
Trim31Q8R0K2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim31Q8R0K2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Trim31Q8R0K2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.17■□□□□ 0.98
Trim31Q8R0K2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim31Q8R0K2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Trim31Q8R0K2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim31Q8R0K2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim31Q8R0K2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim31Q8R0K2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim31Q8R0K2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim31Q8R0K2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim31Q8R0K2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim31Q8R0K2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim31Q8R0K2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim31Q8R0K2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim31Q8R0K2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Trim31Q8R0K2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim31Q8R0K2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trim31Q8R0K2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trim31Q8R0K2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim31Q8R0K2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim31Q8R0K2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trim31Q8R0K2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim31Q8R0K2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms