Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Sox30Q8CGW4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sox30Q8CGW4 Mir3960-201ENSMUST00000198213 73 ntBASIC24.25■■□□□ 1.47
Sox30Q8CGW4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.25■■□□□ 1.47
Sox30Q8CGW4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Sox30Q8CGW4 Terc-201ENSMUST00000082862 423 ntBASIC24.25■■□□□ 1.47
Sox30Q8CGW4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sox30Q8CGW4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Sox30Q8CGW4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sox30Q8CGW4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sox30Q8CGW4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Sox30Q8CGW4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Sox30Q8CGW4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC24.24■■□□□ 1.47
Sox30Q8CGW4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC24.24■■□□□ 1.47
Sox30Q8CGW4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sox30Q8CGW4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sox30Q8CGW4 Gm45364-201ENSMUST00000210883 159 ntBASIC24.24■■□□□ 1.47
Sox30Q8CGW4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Sox30Q8CGW4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sox30Q8CGW4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sox30Q8CGW4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Sox30Q8CGW4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Sox30Q8CGW4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sox30Q8CGW4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sox30Q8CGW4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sox30Q8CGW4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sox30Q8CGW4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Sox30Q8CGW4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sox30Q8CGW4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sox30Q8CGW4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Sox30Q8CGW4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sox30Q8CGW4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sox30Q8CGW4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sox30Q8CGW4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.21■■□□□ 1.47
Sox30Q8CGW4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sox30Q8CGW4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Sox30Q8CGW4 Gm38160-201ENSMUST00000193090 2499 ntBASIC24.21■■□□□ 1.47
Sox30Q8CGW4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Sox30Q8CGW4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.2■■□□□ 1.46
Sox30Q8CGW4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Sox30Q8CGW4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Sox30Q8CGW4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Sox30Q8CGW4 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.2■■□□□ 1.46
Sox30Q8CGW4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sox30Q8CGW4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sox30Q8CGW4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Sox30Q8CGW4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sox30Q8CGW4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.19■■□□□ 1.46
Sox30Q8CGW4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sox30Q8CGW4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
Sox30Q8CGW4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Sox30Q8CGW4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Sox30Q8CGW4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Sox30Q8CGW4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sox30Q8CGW4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sox30Q8CGW4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sox30Q8CGW4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sox30Q8CGW4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Sox30Q8CGW4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Sox30Q8CGW4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sox30Q8CGW4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.17■■□□□ 1.46
Sox30Q8CGW4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sox30Q8CGW4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Sox30Q8CGW4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.17■■□□□ 1.46
Sox30Q8CGW4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sox30Q8CGW4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sox30Q8CGW4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sox30Q8CGW4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Sox30Q8CGW4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Sox30Q8CGW4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Sox30Q8CGW4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Sox30Q8CGW4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC24.15■■□□□ 1.46
Sox30Q8CGW4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Sox30Q8CGW4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.15■■□□□ 1.46
Sox30Q8CGW4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.14■■□□□ 1.46
Sox30Q8CGW4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.14■■□□□ 1.46
Sox30Q8CGW4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Sox30Q8CGW4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Sox30Q8CGW4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Sox30Q8CGW4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Sox30Q8CGW4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Sox30Q8CGW4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.12■■□□□ 1.45
Sox30Q8CGW4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Sox30Q8CGW4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Sox30Q8CGW4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Sox30Q8CGW4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Sox30Q8CGW4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Sox30Q8CGW4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Sox30Q8CGW4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sox30Q8CGW4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Sox30Q8CGW4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Sox30Q8CGW4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Sox30Q8CGW4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
Sox30Q8CGW4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Sox30Q8CGW4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.09■■□□□ 1.45
Sox30Q8CGW4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Sox30Q8CGW4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.09■■□□□ 1.45
Sox30Q8CGW4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Sox30Q8CGW4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Sox30Q8CGW4 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.07■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms